Transcript

stmn1a-202

ID

ZDB-TSCRIPT-090929-4501

Name

stmn1a-202 Nomenclature History

Previous Names

stmn1a-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

stmn1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000132662 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000132662.3|gene_biotype:protein_coding|ENSDARG00000004169.12 transcript_biotype:nonsense_mediated_decay gene_symbol:stmn1a cdna chromosome:GRCz11:19:17208245:17210735:-1
ATTGAGGTGAGAAAACGGCGCGAGGCGAGCTTTGTTACCA
AGCCTGGATCTCTCTGAAGGGCATACTTGGACCGCTTTTA
TTTCTCTGTAACAATGGCTGCTACAAGTGCTTATTTTCAG
ACATTCAGGTTAAAGAGCTGGACAAGCGTGCTTCAGGACA
AGCATTTGAGGTCATCCTTGGGAGTCCTGCTTCAGATGTC
AAGAATGAGTTCCTTCTCTCCCCTCCAAAGAAGAAGGACC
TTTCCTTGGTGGAGATCCAGAAAAAACTTGAAGCAGCAGA
AGAGAGACGCAAGTCTCATGAAGCAGAGGTTCTGAAGCAC
CTAGCAGAAAAGCGTGAGCATGAAAAGGAGGTGCTTCAGA
AAGCTCTAGAAGAAAACAACAACTTCAGCAAGATGGCAGA
AGAGAAACTGAACCAGAAAATGGAGGCCAACAAAGAAAAC
CGTACAGCAATTATGGCAGCTATGAATGAGAAGTTCAAAG
AAAAGGACAAGAAGATAGAAGAGGTTCGAAAGAACAAAGA
AACCAAAGAGCACAATGGTGAAGAAATCTGAAGCTTTTGT
TTTGTGTACACCTTTTTCCAAAGATATATTTTTGTCTTTC
TCCGTTAAAAAGGTTTCATCATGGGCCTTTTTTTTTTTTT
GTCAAAAAAAACAAAAAACCAATGCAGCTTTTGTTTTGTG
TATATAGCATTAGTTTTACAACTTTGATTTATTATTTTTT
TTCTACATCTGTGCTATTTGGACTAGCATTCTCTTTTTCA
GATACATTCATAACTTCTGGACTTGGTGGGGACTTGTGTG
CTTAACATGCCTGTTACTGTCTGCATTTCTTGAGCTTTT

OTTDART00000019562 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000019562|OTTDARG00000015081|ZDB-GENE-031006-14 stmn1a|OTTDARP00000042200 stmn1a-002 LG_ CR925717.8 Danio rerio protein_coding KNOWN, 839 bp
ATTGAGGTGAGAAAACGGCGCGAGGCGAGCTTTGTTACCA
AGCCTGGATCTCTCTGAAGGGCATACTTGGACCGCTTTTA
TTTCTCTGTAACAATGGCTGCTACAAGTGCTTATTTTCAG
ACATTCAGGTTAAAGAGCTGGACAAGCGTGCTTCAGGACA
AGCATTTGAGGTCATCCTTGGGAGTCCTGCTTCAGATGTC
AAGAATGAGTTCCTTCTCTCCCCTCCAAAGAAGAAGGACC
TTTCCTTGGTGGAGATCCAGAAAAAACTTGAAGCAGCAGA
AGAGAGACGCAAGTCTCATGAAGCAGAGGTTCTGAAGCAC
CTAGCAGAAAAGCGTGAGCATGAAAAGGAGGTGCTTCAGA
AAGCTCTAGAAGAAAACAACAACTTCAGCAAGATGGCAGA
AGAGAAACTGAACCAGAAAATGGAGGCCAACAAAGAAAAC
CGTACAGCAATTATGGCAGCTATGAATGAGAAGTTCAAAG
AAAAGGACAAGAAGATAGAAGAGGTTCGAAAGAACAAAGA
AACCAAAGAGCACAATGGTGAAGAAATCTGAAGCTTTTGT
TTTGTGTACACCTTTTTCCAAAGATATATTTTTGTCTTTC
TCCGTTAAAAAGGTTTCATCATGGGCCTTTTTTTTTTTTT
GTCAAAAAAAACAAAAAACCAATGCAGCTTTTGTTTTGTG
TATATAGCATTAGTTTTACAACTTTGATTTATTATTTTTT
TTCTACATCTGTGCTATTTGGACTAGCATTCTCTTTTTCA
GATACATTCATAACTTCTGGACTTGGTGGGGACTTGTGTG
CTTAACATGCCTGTTACTGTCTGCATTTCTTGAGCTTTT

Related Transcripts

Transcripts related to stmn1a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	stmn1a-202	Ensembl	839 nt
mRNA	stmn1a-201 (1) Ensembl	Ensembl	1,083 nt	Select Tool
mRNA	stmn1a-203 (1) Ensembl	Ensembl	221 nt	Select Tool
mRNA	stmn1a-204 (1) Ensembl	Ensembl	3,914 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations