Transcript

tra2a-202

ID

ZDB-TSCRIPT-090929-3696

Name

tra2a-202 Nomenclature History

Previous Names

tra2a-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

tra2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000133873 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000133873.2|gene_biotype:protein_coding|ENSDARG00000007863.11 transcript_biotype:nonsense_mediated_decay gene_symbol:tra2a cdna chromosome:GRCz11:19:20177990:20187213:1
TTTTTTTTTTACCAGTCAATAATATTTTTAAAACAATGAG
TGATACTGAAGAGCAACAATTCCAGAGGAGGGTTATTGGT
CGTGAAGGATTTGAAGAGTTAAGGCCAAGAATGTGGAAGA
ATATTCAAGATAAAAGAAGGCTTTTACAGAGAAAATGTTT
ACAGAGCAGACGGTTAAGTGGGAAGGGGAAAAAAGAACGG
AAGATCGGTCAGATAGAAGCACGCTTGCGTTATGTGTCTA
AAGCAGAAAAAAGAAAAGAGGTTTCAGATTGGGGTGAAGA
AATGAAAAGGAGAGGAAAAATGAAAACTGAACAAATGAAG
ACCGAAGAATAAAATGCCTGAAAGAAAGGAATAGCGTATA
CTGAAAACAGAAGAATGAATGAGTCCGTAGGCTAAGAATC
TCGCTCGGCGTCCAAATCGGATCGGGGGAGTCCTGCCCAA
CCCAAGATGGAGAGCAGGTCTGGTTCTCCCAGCCCTTCCA
GAGCATCCAAGCGTTCTGATTCAAGATCAAGATCACGCTC
CAAGTCCAGGTCCCGCTCTCGTCGGCATTCCAATCGGCGC
TACAGCAGGTCTCGGTCCCACTCCCACCGGAAAAAATCTC
GTTCTCGCTCCTACAGCCCTGAATCCCGACGCAGAAGGAG
CCGAAGTGCATCGCCCAATTCTAACCGCCGCAAACACGCT
GGCAGTCGGAGCTCATACAGCCATGACTCCAAAAAAGATT
CGCACAATCAGGGTGATGCCAGGGCCAATCCGGACCCCAA
TACATGTCTTGGTGTGTTTGGTCTCAGTCTGTACACGACA
GAGCGAGACCTGAGAGAAGTTTTCTCACGTTACGGCTCTT
TAGCCGGTGTCAATGTTGTCTATGATCAGAGAACAGGACG
CTCTCGCGGATTTGCCTTTGTATACTTTGAACACATCGAT
GATGCCAAAGAGGCAATGGAGCGGGCTAATGGCATGGAAC
TAGATGGAAGACGCATCAGGGTGGATTATTCCATCACTAA
ACGTCCACACACACCCACACCAGGCATTTACATGGGTCGA
CCA

OTTDART00000017219 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000017219|OTTDARG00000014416|ZDB-GENE-040426-1391 tra2a|OTTDARP00000042283 tra2a-003 LG_ BX469899.6 Danio rerio protein_coding KNOWN, 1043 bp
TTTTTTTTTTACCAGTCAATAATATTTTTAAAACAATGAG
TGATACTGAAGAGCAACAATTCCAGAGGAGGGTTATTGGT
CGTGAAGGATTTGAAGAGTTAAGGCCAAGAATGTGGAAGA
ATATTCAAGATAAAAGAAGGCTTTTACAGAGAAAATGTTT
ACAGAGCAGACGGTTAAGTGGGAAGGGGAAAAAAGAACGG
AAGATCGGTCAGATAGAAGCACGCTTGCGTTATGTGTCTA
AAGCAGAAAAAAGAAAAGAGGTTTCAGATTGGGGTGAAGA
AATGAAAAGGAGAGGAAAAATGAAAACTGAACAAATGAAG
ACCGAAGAATAAAATGCCTGAAAGAAAGGAATAGCGTATA
CTGAAAACAGAAGAATGAATGAGTCCGTAGGCTAAGAATC
TCGCTCGGCGTCCAAATCGGATCGGGGGAGTCCTGCCCAA
CCCAAGATGGAGAGCAGGTCTGGTTCTCCCAGCCCTTCCA
GAGCATCCAAGCGTTCTGATTCAAGATCAAGATCACGCTC
CAAGTCCAGGTCCCGCTCTCGTCGGCATTCCAATCGGCGC
TACAGCAGGTCTCGGTCCCACTCCCACCGGAAAAAATCTC
GTTCTCGCTCCTACAGCCCTGAATCCCGACGCAGAAGGAG
CCGAAGTGCATCGCCCAATTCTAACCGCCGCAAACACGCT
GGCAGTCGGAGCTCATACAGCCATGACTCCAAAAAAGATT
CGCACAATCAGGGTGATGCCAGGGCCAATCCGGACCCCAA
TACATGTCTTGGTGTGTTTGGTCTCAGTCTGTACACGACA
GAGCGAGACCTGAGAGAAGTTTTCTCACGTTACGGCTCTT
TAGCCGGTGTCAATGTTGTCTATGATCAGAGAACAGGACG
CTCTCGCGGATTTGCCTTTGTATACTTTGAACACATCGAT
GATGCCAAAGAGGCAATGGAGCGGGCTAATGGCATGGAAC
TAGATGGAAGACGCATCAGGGTGGATTATTCCATCACTAA
ACGTCCACACACACCCACACCAGGCATTTACATGGGTCGA
CCA

Related Transcripts

Transcripts related to tra2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tra2a-202	Ensembl	1,043 nt
aberrant processed transcript	tra2a-205 (1) Ensembl	Ensembl	743 nt	Select Tool
mRNA	tra2a-201 (1) Ensembl	Ensembl	1,486 nt	Select Tool
mRNA	tra2a-204 (1) Ensembl	Ensembl	984 nt	Select Tool
mRNA	tra2a-206 (1) Ensembl	Ensembl	809 nt	Select Tool
mRNA	tra2a-207 (1) Ensembl	Ensembl	2,920 nt	Select Tool ZFIN BLAST
ncRNA	tra2a-004 (1) Ensembl	Ensembl	701 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations