Transcript

csmd3 (1 of many)-203

ID
ZDB-TSCRIPT-090929-3308
Name
csmd3 (1 of many)-203 Nomenclature History
Previous Names
  • si:ch211-236p22.1-001
  • si:ch211-236p22.1-002
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000143582 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000143582.3|gene_biotype:protein_coding|ENSDARG00000077905.6 transcript_biotype:protein_coding gene_symbol:CSMD3 cdna chromosome:GRCz11:16:47531516:47746578:-1
AAAAAAGTTAAATATAATTATGACACTTTCCACATATGGA
AGTGCATATATAACCTGCATGCCGGGGCCTGTCAGGAGAT
GGAACTACCCAGCGCCGCTCTCTCAGTGTGGAGGTTTCCT
GACCGACCTCAATGGAGTCATCCTGAGTCCCGGTTTTCCT
GGAAATTATCCTAGTGGACTCGACTGCAACTGGACTGTCA
AACTCCCTATTGGTTTTGGGATTCACCTGCAGTTCCTTAA
CTTCTCCACGGAGTCTGTACACGATTACCTTGAGGTCCGG
AGCGGGACGCTGGACTCAGGATCAGTGATCGATAGGTTCA
GTGGACCTGTTGTTCCCGAATCTTTCTTCAGCACGACCCA
CGAGACCAGCTTCTTCTTTCACAGCGACTACTCCCAGAAC
AAACCCGGCTTCCACATCACCTACGAGGCCTATGAACTGC
AGAGGTGTCCGGATCCACGGCCCTTTCGCAATGGTGTGGT
GATTGGCAGTGATTTTGGAGTGGGCATGACCATCTCCTTC
CAGTGTCTGCCAGGATACACGCTGCTGGGTGAATCGTCGC
TCACCTGTCTGCATGGTGTCAGCCGAAACTGGAACCATCC
TGTGCCTCGCTGTGAAGCACTTTGCGGTGGTAATATCACA
GTCCTCAATGGGACCATCTACTCTCCGGGCCACCCGGCTG
ACTACCCCAATCTTAAAGACTGCATATGGAGCATTCGAGT
ACCTCCAGGCAACGGCATCCACATCAACTTTACCGTTCTC
AACACCGAGCCCATCTACGACTACATCACCATCTGGGACG
GCCCTGACCAAACGTCTCCGCAGATCGGTCAGTTCAGCGG
AAGTTTGCCTCAAGAGCCTGTTTCAAGCACATCCAATCAC
ATCTTGTTGAAGTTTCATAGCGACTTCAGCACCAGCGGAT
TCTTTGTTCTTCGTTATCATGCTTACCAACTCCGTGTCTG
TCAGCCTCCTCCACCGGTCGCCAACGCAGAGATCCTGGCT
GAAGATGACGAATTCCAGATCGGAGACATCATCAGGTACC
GCTGCCTGCCGGGCTTCACGCTGCTGGGGAGCGAGATCTT
GACCTGTCGGCTGGGCGAGCGGCTGCAGATGGATGGTCCT
CCCCCAGTATGCCAAGTTCAGTGTCCTGACAATGAAGTTC
TGTTCGACTCCACTGGTGTCATCCTGAGTCCCGGTTATCC
CGACAGCTACCCAAATCTTCAGATGTGCTCCTGGATGATC
AACGTGGAGAAGGGCTACAACATCACGCTGCACTTCCAGC
TCTTCCAGACCGAGAAGGAGTTTGATATCCTTGAGATCTT
CGACGGTCCTAACATCTACAGTCAGAGTCTGGCGGTGTTG
AGTGGAGATCTCAGCGTGCCCTTCAACATCACCACCACGG
GTCACCAGCTGTTCCTGCGCTGGTCGTCTGATCATGGCAC
CAACAAAAAGGGCTTTCGTATCACTTACGTGGCCATGTAC
TGCAGCACTCCAGACTCTCCTCAGCATGGCTTTGTGCTCA
GCCAGACGGGTGGTCATGTGAACAGTGTGGTTCGCTGGGC
CTGCGACCGTGGATTCAGACTTATCGGGAAAAACATGGCC
GTCTGCAAGAGGACAGAGATCGGCTTTCTGGCCTGGGACT
CTTCTGTGCCTGCATGTCAAGCTGTGTCCTGCGGGATGCC
AGTGGCTCCAGTGAACGGAGGTGTTCTGGCTGCGGATTAT
TCTGCAGGGACTCGAGCCACTTATTTCTGCAATGACGGTT
TCCGCTTGTCCTCCAAAGAAGTGACCAGCACCGTGTGCCA
GGCCGACGGCACCTGGAGCAGCCATAATAAAATCCCCCGC
TGCACAGTGGTGGTTTGTCCCAGTATTGGCTCCTTCACTC
TGGATCACGGTAAATGGAGGATCGTCAATGGTTCACGCTA
TGAATACGGCACTAAAGTCGCTTTTACCTGCAATGCTGGA
TACTACCGGCTTGGCCCCGCCCACATTCACTGTACATCCA
ATGGGACGTGGAGCTGGAGGAATGAGCGACCTCGGTGCAA
GGTCATTTCGTGCGGCGAGCTGCCCACTCCTCCTAATGGA
AAGAAAATTGGGACGCAGACGACCTTTGGAGCAACAGCTA
TTTTTACCTGCAACTCTGGCTTCATACTGGTGGGCTCCAC
TGTACGGGAATGTCTGCCATCGGGTCTCTGGAGCGGGACG
GAGACTCACTGCCTGGCCGGACACTGTGGCATTCCTGAAC
GGATCGTGAACGGTCAAGTGATCGGGGAAAACTTTGGCTA
CAGGGATACAGTGGTCTACCAGTGCAATCCGGGTTTCCGG
CTCATCGGTTCCTCCGTGCGGATCTGCCAACAGGATCACA
ACTGGTCCGGGCAGCTGCCATCCTGCGTGTCCATCAGCTG
TGGTCATCCGGGCAGCCCGATCTACGGCCGTACGGTTGGT
GACGGCTTCAACCTAAATGACGTGGTGACCTTCTTCTGTA
ATAAGGGCTACATTCTGGAAGGGCCGTCTGAAGCGCAGTG
TCAGTCCGACCGGCAGTGGAGCCAGCACCCACCCACATGC
AGAGTCGTCAACTGCACTGATCCCGGAATACCAGCCAACT
CAATCAGGAAGAGCAAAATTGAGTACGGAAACTTCACTTT
CGGGACCGTGGTGTCCTATGACTGCAATCCAGGCTATTAC
CTCTTCGGGTCATCGGTTCTGACCTGCCAGCCGGTGGGCT
ACTGGGACAAGCCATTACCAGAATGCCTGGAGGTGGACTG
TGGTCACCCTGGTTCTCCTCCTCATGCGGTTGTAACAGGA
GACAAATTCACCTTCGGTTCAACAGTTCACTACAGGTGTT
TAGAAGACAGAGTTTTGATTGGTGAATCCACCCGAGCCTG
CCAACTGAACGGCCAGTGGGGTGGCTCGCAACCTCATTGC
TCAGGTGATAAACGGGGAGCGTGTGGAGATCCAGGGACTC
CGGCTCATGCCACCCGAGAGGAGAGCAGTTTCCAGCAGCA
CGCCAAAGTTCGCTTCACCTGCTCCACGGGTCACACTCTC
TACGGCTCGGCTGAGCGGATCTGCTTCCCCAACGGCACCT
GGTCCGGCCGACAGCCCACCTGCAAACCTGTTCAGTGTGG
GAATCCTGGGACTCCGGCTAATGGACGTGTGTCTCATGTT
TCTGGCACCACCTTTTCTCACTCAATCATCTACTCATGTG
TGGAGGGATATCGGCTCTCCGGTTCACCCACTCGACAGTG
CCTGGCCAACGGGACCTGGTCTGGAGGAGAGCCAAACTGC
ACCTTGATCAGCTGTGGGGATTCAGGTGTTCCAGCCAGCG
GTCTGAGAACTGGCGAGGATTTCACCGTCGGCCACAACGT
GTCATATTCCTGCCAGCCGGGATTCATGATGGAGAACGGG
AGCTCTGCGATTCGCACCTGCACCCACAACGGCACCTGGA
GCGGCTCTTTACCATCCTGCCAAGCGGTGACCTGTTCTCC
TCCACCTGCCGTCTCCAATGGTGAAGTGGAGGGTTCGGTG
TTCGAGTGGGGTGTCAGCGTGAGCTACAGATGCATGATGG
GATACGAGCTGTCCTTCCCTGCCGTCCTCACGTGTGCCGG
AAACGGATCCTGGAGCGGAGAGATTCCTCTGTGTCTGCCC
AAGTTCTGTGGTGATCCAGGAATCCCGAGCCGGGCCAGAC
GAGAGGGTCAGAGCTTCATCTTTAAAGCTGAGGTGATGTT
CAGCTGCAGCGCCCCCTATGTGCTGGTGGGCTCCTCGACA
CGCACTTGCCAAGCAGACGCCACATGGAGCGGCACTCAAC
CACGCTGCATAGAACCGACCCGAACGACTTGTGAAAACCC
TGGCACTCCAGAATTCGGCTCTTTGAACAGCAGTCTGGGC
TTTAAGGTTGGTAGTACAGTGAAGTTTGTCTGTCAGACGG
GCCACTTGTTACTGGGCTCCACCACACGCACGTGTCAGCA
GGATTTGACCTGGAGTGGCTCTCAACCTGAATGCATCCCT
CACTCCTGTAAGCAACCAAAGACTCCTCCGCATGCTAATG
TGTTGGGGATGGACCTGCCGTCATTCGGCTACACACTGCT
GTACTCCTGCCAGCCCGGATTCATCCTCACCGGCGGCTCC
GAGCACCGTGCATGCAGACCGGATGGATCCTGGACCGGCA
AAGTGCCCGTCTGTAGAGCCGGCTCCAAAACATCAGAAAA
AGTCATAACGCCTGTACAAGGAACATCCAGTCCCAAAGTC
AACGTTCCCGACGACGTATTTGCGCCCACGTTCTTGTGGA
AAGGTTCCTTCGAGTACAAAGGAGCGAAGCAGCCCATGAC
TTTGACAATCACTAGCTTTAACGCCACCACGGGGAAAGTC
AATGCGACTTTAACTAACAGGCACTCAGAACTGCTGTTGT
CAGGTGTTTACAAGAGTAGAGACGCCCGTCTGACGCTGCG
TCTGTATCACATGAAAACTCTGCTGAAGAACACCTACAGC
AAGACCACAGAGGAGAGCATGATCATGGACGGCTTTGTCT
CTGCTGACCATGAAGGAAACACATACTTGTTTCAAGGCTT
TATACAAGGTAGAGACTACGGCCCATTTGGACTACAGAGA
CAAGGTCTGAACGTTCTGGAGCCCACCAGGAGCCCTGAGA
TCCCACCCAGAACCAACAGCAGCTCTGTGGCCATCGCGAT
TCTTGTGCCTTTCTTTGCCCTCATTTTTGCAGGCTTTGGC
TTTTATCTTTATAAACAGAGGAAGTCTGATAAAGCAGAGT
ACAGCGGCTGCTCTGTGCATGAAAACAACAACGGTCAGGC
TACATTCGAGAACCCCATGTACAACACCAACTCCAAATCC
ATCGAGGGAAAGGTTGTCCGCTTCGATCCCAATCTCAACA
CGGTTTGCACAATGGTGTGA

OTTDART00000016096 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000016096|OTTDARG00000013547|ZDB-GENE-050419-118 si:ch211-236p22.1|OTTDARP00000013663 CH211-236P22.1-002 LG_none 1 BX649637.10,CU062504.6,CU062405.10,CABZ01075826.1,CABZ01028057.1,CU929318.3,CU915776.7,CR388140.8,CU929407.5 Danio rerio protein_coding NOVEL, 4900 bp
AAAAAAGTTAAATATAATTATGACACTTTCCACATATGGA
AGTGCATATATAACCTGCATGCCGGGGCCTGTCAGGAGAT
GGAACTACCCAGCGCCGCTCTCTCAGTGTGGAGGTTTCCT
GACCGACCTCAATGGAGTCATCCTGAGTCCCGGTTTTCCT
GGAAATTATCCTAGTGGACTCGACTGCAACTGGACTGTCA
AACTCCCTATTGGTTTTGGGATTCACCTGCAGTTCCTTAA
CTTCTCCACGGAGTCTGTACACGATTACCTTGAGGTCCGG
AGCGGGACGCTGGACTCAGGATCAGTGATCGATAGGTTCA
GTGGACCTGTTGTTCCCGAATCTTTCTTCAGCACGACCCA
CGAGACCAGCTTCTTCTTTCACAGCGACTACTCCCAGAAC
AAACCCGGCTTCCACATCACCTACGAGGCCTATGAACTGC
AGAGGTGTCCGGATCCACGGCCCTTTCGCAATGGTGTGGT
GATTGGCAGTGATTTTGGAGTGGGCATGACCATCTCCTTC
CAGTGTCTGCCAGGATACACGCTGCTGGGTGAATCGTCGC
TCACCTGTCTGCATGGTGTCAGCCGAAACTGGAACCATCC
TGTGCCTCGCTGTGAAGCACTTTGCGGTGGTAATATCACA
GTCCTCAATGGGACCATCTACTCTCCGGGCCACCCGGCTG
ACTACCCCAATCTTAAAGACTGCATATGGAGCATTCGAGT
ACCTCCAGGCAACGGCATCCACATCAACTTTACCGTTCTC
AACACCGAGCCCATCTACGACTACATCACCATCTGGGACG
GCCCTGACCAAACGTCTCCGCAGATCGGTCAGTTCAGCGG
AAGTTTGCCTCAAGAGCCTGTTTCAAGCACATCCAATCAC
ATCTTGTTGAAGTTTCATAGCGACTTCAGCACCAGCGGAT
TCTTTGTTCTTCGTTATCATGCTTACCAACTCCGTGTCTG
TCAGCCTCCTCCACCGGTCGCCAACGCAGAGATCCTGGCT
GAAGATGACGAATTCCAGATCGGAGACATCATCAGGTACC
GCTGCCTGCCGGGCTTCACGCTGCTGGGGAGCGAGATCTT
GACCTGTCGGCTGGGCGAGCGGCTGCAGATGGATGGTCCT
CCCCCAGTATGCCAAGTTCAGTGTCCTGACAATGAAGTTC
TGTTCGACTCCACTGGTGTCATCCTGAGTCCCGGTTATCC
CGACAGCTACCCAAATCTTCAGATGTGCTCCTGGATGATC
AACGTGGAGAAGGGCTACAACATCACGCTGCACTTCCAGC
TCTTCCAGACCGAGAAGGAGTTTGATATCCTTGAGATCTT
CGACGGTCCTAACATCTACAGTCAGAGTCTGGCGGTGTTG
AGTGGAGATCTCAGCGTGCCCTTCAACATCACCACCACGG
GTCACCAGCTGTTCCTGCGCTGGTCGTCTGATCATGGCAC
CAACAAAAAGGGCTTTCGTATCACTTACGTGGCCATGTAC
TGCAGCACTCCAGACTCTCCTCAGCATGGCTTTGTGCTCA
GCCAGACGGGTGGTCATGTGAACAGTGTGGTTCGCTGGGC
CTGCGACCGTGGATTCAGACTTATCGGGAAAAACATGGCC
GTCTGCAAGAGGACAGAGATCGGCTTTCTGGCCTGGGACT
CTTCTGTGCCTGCATGTCAAGCTGTGTCCTGCGGGATGCC
AGTGGCTCCAGTGAACGGAGGTGTTCTGGCTGCGGATTAT
TCTGCAGGGACTCGAGCCACTTATTTCTGCAATGACGGTT
TCCGCTTGTCCTCCAAAGAAGTGACCAGCACCGTGTGCCA
GGCCGACGGCACCTGGAGCAGCCATAATAAAATCCCCCGC
TGCACAGTGGTGGTTTGTCCCAGTATTGGCTCCTTCACTC
TGGATCACGGTAAATGGAGGATCGTCAATGGTTCACGCTA
TGAATACGGCACTAAAGTCGCTTTTACCTGCAATGCTGGA
TACTACCGGCTTGGCCCCGCCCACATTCACTGTACATCCA
ATGGGACGTGGAGCTGGAGGAATGAGCGACCTCGGTGCAA
GGTCATTTCGTGCGGCGAGCTGCCCACTCCTCCTAATGGA
AAGAAAATTGGGACGCAGACGACCTTTGGAGCAACAGCTA
TTTTTACCTGCAACTCTGGCTTCATACTGGTGGGCTCCAC
TGTACGGGAATGTCTGCCATCGGGTCTCTGGAGCGGGACG
GAGACTCACTGCCTGGCCGGACACTGTGGCATTCCTGAAC
GGATCGTGAACGGTCAAGTGATCGGGGAAAACTTTGGCTA
CAGGGATACAGTGGTCTACCAGTGCAATCCGGGTTTCCGG
CTCATCGGTTCCTCCGTGCGGATCTGCCAACAGGATCACA
ACTGGTCCGGGCAGCTGCCATCCTGCGTGTCCATCAGCTG
TGGTCATCCGGGCAGCCCGATCTACGGCCGTACGGTTGGT
GACGGCTTCAACCTAAATGACGTGGTGACCTTCTTCTGTA
ATAAGGGCTACATTCTGGAAGGGCCGTCTGAAGCGCAGTG
TCAGTCCGACCGGCAGTGGAGCCAGCACCCACCCACATGC
AGAGTCGTCAACTGCACTGATCCCGGAATACCAGCCAACT
CAATCAGGAAGAGCAAAATTGAGTACGGAAACTTCACTTT
CGGGACCGTGGTGTCCTATGACTGCAATCCAGGCTATTAC
CTCTTCGGGTCATCGGTTCTGACCTGCCAGCCGGTGGGCT
ACTGGGACAAGCCATTACCAGAATGCCTGGAGGTGGACTG
TGGTCACCCTGGTTCTCCTCCTCATGCGGTTGTAACAGGA
GACAAATTCACCTTCGGTTCAACAGTTCACTACAGGTGTT
TAGAAGACAGAGTTTTGATTGGTGAATCCACCCGAGCCTG
CCAACTGAACGGCCAGTGGGGTGGCTCGCAACCTCATTGC
TCAGGTGATAAACGGGGAGCGTGTGGAGATCCAGGGACTC
CGGCTCATGCCACCCGAGAGGAGAGCAGTTTCCAGCAGCA
CGCCAAAGTTCGCTTCACCTGCTCCACGGGTCACACTCTC
TACGGCTCGGCTGAGCGGATCTGCTTCCCCAACGGCACCT
GGTCCGGCCGACAGCCCACCTGCAAACCTGTTCAGTGTGG
GAATCCTGGGACTCCGGCTAATGGACGTGTGTCTCATGTT
TCTGGCACCACCTTTTCTCACTCAATCATCTACTCATGTG
TGGAGGGATATCGGCTCTCCGGTTCACCCACTCGACAGTG
CCTGGCCAACGGGACCTGGTCTGGAGGAGAGCCAAACTGC
ACCTTGATCAGCTGTGGGGATTCAGGTGTTCCAGCCAGCG
GTCTGAGAACTGGCGAGGATTTCACCGTCGGCCACAACGT
GTCATATTCCTGCCAGCCGGGATTCATGATGGAGAACGGG
AGCTCTGCGATTCGCACCTGCACCCACAACGGCACCTGGA
GCGGCTCTTTACCATCCTGCCAAGCGGTGACCTGTTCTCC
TCCACCTGCCGTCTCCAATGGTGAAGTGGAGGGTTCGGTG
TTCGAGTGGGGTGTCAGCGTGAGCTACAGATGCATGATGG
GATACGAGCTGTCCTTCCCTGCCGTCCTCACGTGTGCCGG
AAACGGATCCTGGAGCGGAGAGATTCCTCTGTGTCTGCCC
AAGTTCTGTGGTGATCCAGGAATCCCGAGCCGGGCCAGAC
GAGAGGGTCAGAGCTTCATCTTTAAAGCTGAGGTGATGTT
CAGCTGCAGCGCCCCCTATGTGCTGGTGGGCTCCTCGACA
CGCACTTGCCAAGCAGACGCCACATGGAGCGGCACTCAAC
CACGCTGCATAGAACCGACCCGAACGACTTGTGAAAACCC
TGGCACTCCAGAATTCGGCTCTTTGAACAGCAGTCTGGGC
TTTAAGGTTGGTAGTACAGTGAAGTTTGTCTGTCAGACGG
GCCACTTGTTACTGGGCTCCACCACACGCACGTGTCAGCA
GGATTTGACCTGGAGTGGCTCTCAACCTGAATGCATCCCT
CACTCCTGTAAGCAACCAAAGACTCCTCCGCATGCTAATG
TGTTGGGGATGGACCTGCCGTCATTCGGCTACACACTGCT
GTACTCCTGCCAGCCCGGATTCATCCTCACCGGCGGCTCC
GAGCACCGTGCATGCAGACCGGATGGATCCTGGACCGGCA
AAGTGCCCGTCTGTAGAGCCGGCTCCAAAACATCAGAAAA
AGTCATAACGCCTGTACAAGGAACATCCAGTCCCAAAGTC
AACGTTCCCGACGACGTATTTGCGCCCACGTTCTTGTGGA
AAGGTTCCTTCGAGTACAAAGGAGCGAAGCAGCCCATGAC
TTTGACAATCACTAGCTTTAACGCCACCACGGGGAAAGTC
AATGCGACTTTAACTAACAGGCACTCAGAACTGCTGTTGT
CAGGTGTTTACAAGAGTAGAGACGCCCGTCTGACGCTGCG
TCTGTATCACATGAAAACTCTGCTGAAGAACACCTACAGC
AAGACCACAGAGGAGAGCATGATCATGGACGGCTTTGTCT
CTGCTGACCATGAAGGAAACACATACTTGTTTCAAGGCTT
TATACAAGGTAGAGACTACGGCCCATTTGGACTACAGAGA
CAAGGTCTGAACGTTCTGGAGCCCACCAGGAGCCCTGAGA
TCCCACCCAGAACCAACAGCAGCTCTGTGGCCATCGCGAT
TCTTGTGCCTTTCTTTGCCCTCATTTTTGCAGGCTTTGGC
TTTTATCTTTATAAACAGAGGAAGTCTGATAAAGCAGAGT
ACAGCGGCTGCTCTGTGCATGAAAACAACAACGGTCAGGC
TACATTCGAGAACCCCATGTACAACACCAACTCCAAATCC
ATCGAGGGAAAGGTTGTCCGCTTCGATCCCAATCTCAACA
CGGTTTGCACAATGGTGTGA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations