Transcript

herpud1-202

ID

ZDB-TSCRIPT-090929-3087

Name

herpud1-202 Nomenclature History

Previous Names

herpud1-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

herpud1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000141465 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000141465.2|gene_biotype:protein_coding|ENSDARG00000024314.12 transcript_biotype:nonsense_mediated_decay gene_symbol:herpud1 cdna chromosome:GRCz11:18:17600946:17605795:1
GTTCGCGCGGACTGGACCGTGAAAGACCTCAAATGTCACC
TCTCCAAGGTTTATCCCAACAACCCGGCTGAGAAAGACCA
GAGACTCATTTACTCAGGCAAGCTGCTTCTGGACAACCTG
CTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCA
AACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACC
TGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACA
CACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCC
AGTCTTCTGGACCATCTCCAATCAGAATGCCCCAGGACCT
GCCTTCATCAACCCAGAGGGAGCCAATCAAAATCTCCGTA
TGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAGGAGGA
CATGAACCGAGATTGGCTGGACTGGATGTACACAGCATCA
CGATTGGGTGTCTTCCTAAGCATTGTATACTTCTATTCCA
GCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTGGTTAT
TATGTACCTACACACAGCAGGCTGGTTTCCTTTCAGACAG
AGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACCCGAGG
TCAATCAGAACCAGCAGA

OTTDART00000015391 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000015391|OTTDARG00000012988|ZDB-GENE-050913-47 herpud1|OTTDARP00000044061 herpud1-003 LG_ BX470170.5 Danio rerio protein_coding KNOWN, 618 bp
GTTCGCGCGGACTGGACCGTGAAAGACCTCAAATGTCACC
TCTCCAAGGTTTATCCCAACAACCCGGCTGAGAAAGACCA
GAGACTCATTTACTCAGGCAAGCTGCTTCTGGACAACCTG
CTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCA
AACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACC
TGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACA
CACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCC
AGTCTTCTGGACCATCTCCAATCAGAATGCCCCAGGACCT
GCCTTCATCAACCCAGAGGGAGCCAATCAAAATCTCCGTA
TGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAGGAGGA
CATGAACCGAGATTGGCTGGACTGGATGTACACAGCATCA
CGATTGGGTGTCTTCCTAAGCATTGTATACTTCTATTCCA
GCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTGGTTAT
TATGTACCTACACACAGCAGGCTGGTTTCCTTTCAGACAG
AGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACCCGAGG
TCAATCAGAACCAGCAGA

Related Transcripts

Transcripts related to herpud1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	herpud1-201 (1) Ensembl	Ensembl	2,043 nt	Select Tool
aberrant processed transcript	herpud1-202	Ensembl	618 nt
mRNA	herpud1-203 (1) Ensembl	Ensembl	1,243 nt	Select Tool
mRNA	herpud1-204 (1) Ensembl	Ensembl	2,209 nt	Select Tool
mRNA	herpud1-205 (1) Ensembl	Ensembl	5,657 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations