Transcript

chs1-005

ID

ZDB-TSCRIPT-090929-22762

Name

chs1-005 Nomenclature History

Previous Names

si:zfos-1762d12.1-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

chs1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142160 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000142160.2|gene_biotype:protein_coding|ENSDARG00000068515.7 transcript_biotype:retained_intron gene_symbol:chs1 cdna chromosome:GRCz11:13:287111:287907:-1
TGAAGAAGCTGACCTACGCCAATCTGAAGAGGAACCTTCA
GGAGCAGATCCGCTACACGCTGAGGAACAAGAACCAGGAG
GACCTGTGCGAGGAGCTGGTGCTGATCCTGACCGACACGC
TGAACGACGAGCTGAAGGATAAAGTGGGTCCTGAAGACGT
CTTGACCGAGACGCAGCTGGAGGAACTGCAGTATGCGCTC
AATGAAGCGGCGCGGCGCATCGTCAAGACCAACCGCATCG
AGACCGGCTCACAGCGGGTGGAGCGGCGGGTCAAACGGGG
CATCGAGAGGACGCTGGTGGCGCCGCAGGTGGAGAAACTG
TCAGAGGTGATGATTCAGTGCAAACATCTGCTCTCACTTT
CACCACAACACGAGCTCCAGTAAAGCGGAAATCAGCTGTT
TAAAATAAGCAGCAGTCAGATTAGATAAGCGGAGCGTCTT
ATTATTCGACATGTTTAATGAACGATATTCCTCCGTCATC
ATCAGGACGAGCAGGATTTCTGGGAGAAGCTGTTGGAGCG
CTACCTGAAGCCCATTCAGGATGATAAAGCTCATCTGGAG
GAGGTGACGCGGGAGCTCAAGTCTCTGAGGAACAAAGCCG
TGTTTCTGTACTTCATCATTAACGTCCTCTGGGTCGTAGC
CACGTTCTTCCTGCAGGCCATCGGCGGAGACGTTCTGAGT
ATAGAAATCCCCAAATATTACCCCAATAAAACCCTG

OTTDART00000040251 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000040251|OTTDARG00000029350|ZDB-GENE-030131-1188 chs1|no_translation ZFOS-1762D12.1-005 LG_ CU694274.5 Danio rerio protein_coding NOVEL, 716 bp
TGAAGAAGCTGACCTACGCCAATCTGAAGAGGAACCTTCA
GGAGCAGATCCGCTACACGCTGAGGAACAAGAACCAGGAG
GACCTGTGCGAGGAGCTGGTGCTGATCCTGACCGACACGC
TGAACGACGAGCTGAAGGATAAAGTGGGTCCTGAAGACGT
CTTGACCGAGACGCAGCTGGAGGAACTGCAGTATGCGCTC
AATGAAGCGGCGCGGCGCATCGTCAAGACCAACCGCATCG
AGACCGGCTCACAGCGGGTGGAGCGGCGGGTCAAACGGGG
CATCGAGAGGACGCTGGTGGCGCCGCAGGTGGAGAAACTG
TCAGAGGTGATGATTCAGTGCAAACATCTGCTCTCACTTT
CACCACAACACGAGCTCCAGTAAAGCGGAAATCAGCTGTT
TAAAATAAGCAGCAGTCAGATTAGATAAGCGGAGCGTCTT
ATTATTCGACATGTTTAATGAACGATATTCCTCCGTCATC
ATCAGGACGAGCAGGATTTCTGGGAGAAGCTGTTGGAGCG
CTACCTGAAGCCCATTCAGGATGATAAAGCTCATCTGGAG
GAGGTGACGCGGGAGCTCAAGTCTCTGAGGAACAAAGCCG
TGTTTCTGTACTTCATCATTAACGTCCTCTGGGTCGTAGC
CACGTTCTTCCTGCAGGCCATCGGCGGAGACGTTCTGAGT
ATAGAAATCCCCAAATATTACCCCAATAAAACCCTG

Related Transcripts

Transcripts related to chs1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	chs1-201 (1) Ensembl	Ensembl	4,652 nt	Select Tool ZFIN BLAST
mRNA	chs1-202 (1) Ensembl	Ensembl	487 nt	Select Tool ZFIN BLAST
mRNA	chs1-203 (1) Ensembl	Ensembl	714 nt	Select Tool ZFIN BLAST
mRNA	chs1-204 (1) Ensembl	Ensembl	494 nt	Select Tool ZFIN BLAST
mRNA	chs1-205 (1) Ensembl	Ensembl	2,326 nt	Select Tool ZFIN BLAST
ncRNA	chs1-005	Ensembl	716 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations