Transcript

pfn1-002

ID

ZDB-TSCRIPT-090929-22363

Name

pfn1-002 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

pfn1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000137106 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000137106.2|gene_biotype:protein_coding|ENSDARG00000088091.4 transcript_biotype:retained_intron gene_symbol:pfn1 cdna chromosome:GRCz11:23:44599120:44602016:1
ACTTTGCATCGGAGCAGAGACGCACTCAGATCGACATCAG
CAGTCATGAGCTGGGACAGCTACATCAGCAGCCTGACCCA
GAGCGAGTGGGTGGATGATGCGGTCATCCTCGGTGCAACA
CCGGGTCAGGAGTCCATTTGGGCGTCAGCACCGGGAGGCT
GGCTCTCGGGCGTAACGGCAGCAGAGGTTAAGGCAATCCT
CAACACAGACCGCGGGAAACTGTTTTGCAATGGTGTGACT
TTGGCCGGCAAGCGCTGCACTGTGGTGAGAGACGCTCTGT
TTGTGGACGGTCAATTCACGATGGACGTCAAGATGAAGAC
CTCCGAGAAAGAGCCCGACCCTTTCTCATTGACCATCGGC
AAATCTATAAGCGGTACTGCGCACATATTAACACTGGCTT
TCCTACTATAGTCGTATAAACTCTACACGACACGCAGACA
TTCTCTTCAGTTTATAAAAGTCATTTATATAAGAGTGTTC
ATGTTCTATTTATATAACCTAATTTCCTTTTTAATTATTA
ATAATTAATTAGTAAAGTTCATCTCATACAAGACACATTT
TCTTTACACA

OTTDART00000042668 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000042668|OTTDARG00000030744|ZDB-GENE-031002-33 pfn1|no_translation CH1073-89L17.1-002 LG_ CU633889.5 Danio rerio protein_coding NOVEL, 570 bp
ACTTTGCATCGGAGCAGAGACGCACTCAGATCGACATCAG
CAGTCATGAGCTGGGACAGCTACATCAGCAGCCTGACCCA
GAGCGAGTGGGTGGATGATGCGGTCATCCTCGGTGCAACA
CCGGGTCAGGAGTCCATTTGGGCGTCAGCACCGGGAGGCT
GGCTCTCGGGCGTAACGGCAGCAGAGGTTAAGGCAATCCT
CAACACAGACCGCGGGAAACTGTTTTGCAATGGTGTGACT
TTGGCCGGCAAGCGCTGCACTGTGGTGAGAGACGCTCTGT
TTGTGGACGGTCAATTCACGATGGACGTCAAGATGAAGAC
CTCCGAGAAAGAGCCCGACCCTTTCTCATTGACCATCGGC
AAATCTATAAGCGGTACTGCGCACATATTAACACTGGCTT
TCCTACTATAGTCGTATAAACTCTACACGACACGCAGACA
TTCTCTTCAGTTTATAAAAGTCATTTATATAAGAGTGTTC
ATGTTCTATTTATATAACCTAATTTCCTTTTTAATTATTA
ATAATTAATTAGTAAAGTTCATCTCATACAAGACACATTT
TCTTTACACA

Related Transcripts

Transcripts related to pfn1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	pfn1-201 (1) Ensembl	Ensembl	972 nt	Select Tool ZFIN BLAST
mRNA	pfn1-206 (1) Ensembl	Ensembl	3,094 nt	Select Tool ZFIN BLAST
ncRNA	pfn1-002	Ensembl	570 nt
ncRNA	pfn1-003 (1) Ensembl	Ensembl	446 nt	Select Tool ZFIN BLAST
ncRNA	pfn1-004 (1) Ensembl	Ensembl	847 nt	Select Tool ZFIN BLAST
ncRNA	pfn1-005 (1) Ensembl	Ensembl	1,028 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations