Transcript

rrbp1a-203

ID
ZDB-TSCRIPT-090929-20837
Name
rrbp1a-203 Nomenclature History
Previous Names
  • rrbp1a-002
  • si:dkey-76k16.7-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000138181 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000138181.3|gene_biotype:protein_coding|ENSDARG00000013763.12 transcript_biotype:nonsense_mediated_decay gene_symbol:rrbp1a cdna chromosome:GRCz11:13:33611703:33639021:-1
GAAAGTGCCACGACTCCACACAGACATCGGCTGACTCCTC
AAGCTGGGGATAAGATTTTTTTTTTGTTTTTTTGCTGGCG
TGGTAAGGCAGTTGGATTCGAGATATTCTCCTCTCTATCA
ACTCTTCCTGAAGTGATTCATCAAACGGAAATCTGCCGCG
AGAAAAGTAAGGACACTTGCAGTCATGGACATCTATGATC
CTCAAACTCTTGGAATTGTGGTGTTTGGTGGCTTCATGGT
GTTCTCAGCCATTGGGATTGCTTTGGTCTCAACATTTTCC
ATGAAAGAGACGTCATATGAAGAGGCTTTAGCCAAACAGC
GCAAGGAGCAAGGGAAGACCCAATCCAGCCAAAAATCAGA
CAAGAAGAAAAAGGACAAGGTAGCTGAGAAGAAAAATCGT
AGTAAGAAAAAGGAAGATAAACCTAATGGGAAACTCCTGG
AATCAGAGTCCACTGCTGAGGTTTCTGAAGTAGCAAATGA
GCCTAGTCCTCCCATTCCTTTAGCCCCAGAACAAGTTGCT
GTGCCAGCACCCAAACAAGAGGCTTCAATTCAGAAATCTG
TCCAACCCACCTCTTCTCAGAAGACCACTTCACCTGCCCT
GGCTCAGAAATCAGTCCCAGCTGTCCAAGCTCAGAAGTCA
GCTCCACCTGCCCCGGCCCAAAAGGCTGCTCCACCTGCCC
CAGCCCAAAAGTCTGCTCCACCTGCTTCGGCCCAAAAATC
TGCTCCAGCACCTCCCACTCAAAAAACCTCTCCAGCATCT
CCAAACCAGAAATCCTCTCCAGCGCCTCCCACCCAAAAAA
CATCTCCAAATCCTTCTGGCAAAAAATCTGCTTCACCTCC
TCCTGCCCAGAAACCTGCTTCACCTGCCCCAGCCTCAAAG
TCAGCTCCAGCTGCCCCTGCCCAGAAGTCCACTACAGTTG
CTCCATCCCAAAAGTCTGCTTCAGAAGCTCCAGCCCAGAA
GGCCACTCCACCTGCCCCAGCCCAGAAAGCTGCTACAACT
GCCCCAGCCCAGAAAGCTGCTCCACCTGCCCAAGCTCAGA
AAGCCACGTCATCTTCCTCATCCCAAAAACCCACTCCACC
TGCTCCAGTCCAAAAATCTGCTCAGCCGGCCCCTACAGAA
AAATCTGCCAAAGCCCAAAAAGCTGCTTCAACTGCCCCAG
CACAGAAATCATCTCCACCTGCCCCACCCCAAAAACCTGC
TTCAAATCCTCAGCCCCAGAAAGGCACTCAAAAAAGTGCA
AGAATTAGAAGAGACTGCAGAGCGCTTGAGAGCAGAGAGC
CAAGGCAACCAACAGCTGCAGGAGCAAGTGAAGCTGCTGG
AGGCTCAGTTGGAGGAACAGCTGCAGTCAGCTTCCACTGA
CAGTCAGAGTCAATCTGAAGAGATGGCACACTTGAAGCAG
GCTTTAGCTGATACAGAAAGCCAGTTGAATTCGGCCCAGA
AGGAGGCACAGACACAGAGAGAGGAACTTTTACAGGTCAA
GCAGCAACTCAACGACGTGACAAAACGAGCTCAGGGAGTG
GCGGAGAACGGGCAGCCTGAGGCAGAGGAGTGTCAGGTCC
AGGATCAGCTTGAACAGACATTAGAAAAACTGCAGGGTGA
ACAGGCTCTAAACCAGCAGCTCTCTGCAGAAGTGGAGCAG
GCTCAGGAAACCCTCAAAATTCATCTCCAGAGCCATCTAG
AACAGATGAAATCAGCTGAAGACACTGCAGCCATGGGAGA
TGTTGTTCAGCTGAAGGAGTGTCTTGAGAAAGAGCGAAAG
ATGACCAAAGATTTAGGCCAGGCAGCCACTAAACTTCAGC
AGCTGCTGAGAAACAGTCAGGACCAACTTGCCAAAGAGAA
GGAGAAAGTCAGAAGCCTGCACGATCAGTTGCAAAACAAG
GTGAACAAGCTTTCATAACAATAAAAGTTTGTAGGTGGTA
CAGCTGTGTGCTTATGAATTGATGTGCTTTTGTTTTCAGG
AAGGAGATGGAGAGCTGAAGCAAGGCACTTCTGTTTGAGG
TGGAAAGCAAAACATTTAGCCAAAAATTGCCTTACAATGA
CCAAAATGAAGCATTCCGATGTTTTTTTTTTATTATTATT
ATTTTTTGTCGTACTGTAGTCATGGGAGAAATTGTATGAA
GACCAATGGAGAAACCTAACTTGTGCAAATGTTTTTATGG
AGATGCGCTGGAACCATTTTCACTTTACATTCCACCTAAA
ACCTTCTGGCTATGTCAGAAACAATGCCTTATATATATCC
TTCGTGTTCCTGCATTTCTCCTGATGTCAGTGTTAAAAGG
GAAACCGTATGTACGTTATGCGTACATCAACTAGTGCAAT
TAATTACTTGGAAGTAAATGAGTATGGATAATTGTATGGT
ACATGGATTCAGCATTTGGAATGGCCTCTCTGTAGCTGGC
TTCAACACCACTGTATAAGTTTGATAATAAATAATAAACA
GCAACATAGTTA

OTTDART00000040731 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000040731|OTTDARG00000029645|ZDB-GENE-030131-9795 rrbp1a|OTTDARP00000032553 DKEY-76K16.7-002 LG_ BX005372.6 Danio rerio protein_coding KNOWN, 2452 bp
GAAAGTGCCACGACTCCACACAGACATCGGCTGACTCCTC
AAGCTGGGGATAAGATTTTTTTTTTGTTTTTTTGCTGGCG
TGGTAAGGCAGTTGGATTCGAGATATTCTCCTCTCTATCA
ACTCTTCCTGAAGTGATTCATCAAACGGAAATCTGCCGCG
AGAAAAGTAAGGACACTTGCAGTCATGGACATCTATGATC
CTCAAACTCTTGGAATTGTGGTGTTTGGTGGCTTCATGGT
GTTCTCAGCCATTGGGATTGCTTTGGTCTCAACATTTTCC
ATGAAAGAGACGTCATATGAAGAGGCTTTAGCCAAACAGC
GCAAGGAGCAAGGGAAGACCCAATCCAGCCAAAAATCAGA
CAAGAAGAAAAAGGACAAGGTAGCTGAGAAGAAAAATCGT
AGTAAGAAAAAGGAAGATAAACCTAATGGGAAACTCCTGG
AATCAGAGTCCACTGCTGAGGTTTCTGAAGTAGCAAATGA
GCCTAGTCCTCCCATTCCTTTAGCCCCAGAACAAGTTGCT
GTGCCAGCACCCAAACAAGAGGCTTCAATTCAGAAATCTG
TCCAACCCACCTCTTCTCAGAAGACCACTTCACCTGCCCT
GGCTCAGAAATCAGTCCCAGCTGTCCAAGCTCAGAAGTCA
GCTCCACCTGCCCCGGCCCAAAAGGCTGCTCCACCTGCCC
CAGCCCAAAAGTCTGCTCCACCTGCTTCGGCCCAAAAATC
TGCTCCAGCACCTCCCACTCAAAAAACCTCTCCAGCATCT
CCAAACCAGAAATCCTCTCCAGCGCCTCCCACCCAAAAAA
CATCTCCAAATCCTTCTGGCAAAAAATCTGCTTCACCTCC
TCCTGCCCAGAAACCTGCTTCACCTGCCCCAGCCTCAAAG
TCAGCTCCAGCTGCCCCTGCCCAGAAGTCCACTACAGTTG
CTCCATCCCAAAAGTCTGCTTCAGAAGCTCCAGCCCAGAA
GGCCACTCCACCTGCCCCAGCCCAGAAAGCTGCTACAACT
GCCCCAGCCCAGAAAGCTGCTCCACCTGCCCAAGCTCAGA
AAGCCACGTCATCTTCCTCATCCCAAAAACCCACTCCACC
TGCTCCAGTCCAAAAATCTGCTCAGCCGGCCCCTACAGAA
AAATCTGCCAAAGCCCAAAAAGCTGCTTCAACTGCCCCAG
CACAGAAATCATCTCCACCTGCCCCACCCCAAAAACCTGC
TTCAAATCCTCAGCCCCAGAAAGGCACTCAAAAAAGTGCA
AGAATTAGAAGAGACTGCAGAGCGCTTGAGAGCAGAGAGC
CAAGGCAACCAACAGCTGCAGGAGCAAGTGAAGCTGCTGG
AGGCTCAGTTGGAGGAACAGCTGCAGTCAGCTTCCACTGA
CAGTCAGAGTCAATCTGAAGAGATGGCACACTTGAAGCAG
GCTTTAGCTGATACAGAAAGCCAGTTGAATTCGGCCCAGA
AGGAGGCACAGACACAGAGAGAGGAACTTTTACAGGTCAA
GCAGCAACTCAACGACGTGACAAAACGAGCTCAGGGAGTG
GCGGAGAACGGGCAGCCTGAGGCAGAGGAGTGTCAGGTCC
AGGATCAGCTTGAACAGACATTAGAAAAACTGCAGGGTGA
ACAGGCTCTAAACCAGCAGCTCTCTGCAGAAGTGGAGCAG
GCTCAGGAAACCCTCAAAATTCATCTCCAGAGCCATCTAG
AACAGATGAAATCAGCTGAAGACACTGCAGCCATGGGAGA
TGTTGTTCAGCTGAAGGAGTGTCTTGAGAAAGAGCGAAAG
ATGACCAAAGATTTAGGCCAGGCAGCCACTAAACTTCAGC
AGCTGCTGAGAAACAGTCAGGACCAACTTGCCAAAGAGAA
GGAGAAAGTCAGAAGCCTGCACGATCAGTTGCAAAACAAG
GTGAACAAGCTTTCATAACAATAAAAGTTTGTAGGTGGTA
CAGCTGTGTGCTTATGAATTGATGTGCTTTTGTTTTCAGG
AAGGAGATGGAGAGCTGAAGCAAGGCACTTCTGTTTGAGG
TGGAAAGCAAAACATTTAGCCAAAAATTGCCTTACAATGA
CCAAAATGAAGCATTCCGATGTTTTTTTTTTATTATTATT
ATTTTTTGTCGTACTGTAGTCATGGGAGAAATTGTATGAA
GACCAATGGAGAAACCTAACTTGTGCAAATGTTTTTATGG
AGATGCGCTGGAACCATTTTCACTTTACATTCCACCTAAA
ACCTTCTGGCTATGTCAGAAACAATGCCTTATATATATCC
TTCGTGTTCCTGCATTTCTCCTGATGTCAGTGTTAAAAGG
GAAACCGTATGTACGTTATGCGTACATCAACTAGTGCAAT
TAATTACTTGGAAGTAAATGAGTATGGATAATTGTATGGT
ACATGGATTCAGCATTTGGAATGGCCTCTCTGTAGCTGGC
TTCAACACCACTGTATAAGTTTGATAATAAATAATAAACA
GCAACATAGTTA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations