Transcript

bbs4-201

ID
ZDB-TSCRIPT-090929-19077
Name
bbs4-201 Nomenclature History
Previous Names
  • bbs4-003
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000092919 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000092919.5|gene_biotype:protein_coding|ENSDARG00000063522.7 transcript_biotype:nonsense_mediated_decay gene_symbol:bbs4 cdna chromosome:GRCz11:25:2668892:2702935:1
AAGAGAGAAGCGCGATGGCTGACGACGCTATGAGAACGGA
TGTTCAGCTGCCGGTGGCCACCGAGCTCAAGAAACCTCGT
CTGAAGAAAGCTCCTGAGCTTCCCATCCTGGAGAAAAGAA
ACTGGCTCATACATCTGCATTATATCCGCAAGGATTATGA
GACCTGCAAGGCTATTGTTAAAGAACAGCTGCATGAAACT
CAAGGCATGTGTGAATATGCTGTGTATGTGCAAGCTCTGA
TCATGCGGTTAGAAGGGAAGATTCAGGAGTCTCTGGAGTT
GTTTCAGAGTTGTGCCATCATTAACCCCACAAGCTCAGAC
AACCTCAAACAAGTGGCCCGATCGCTTTTCCTGTTAGGGA
AGCACAAAGCTGCCATTGAGGTTTATAATGAAGCTGCACG
TCTCAATCAGAAAGACTGGGAGATCAGCCATAATCTGGGC
GTTTGCTACATCTACACCAAAGACTTCAGGAGTGCAGAAG
AGCAGTTAAACTTGGCATTACAGCTGAATAAACACGATCT
GACCTACATGATGCTGGGAAAAATACACTTACTGCAGGGG
GACACAGAGAAAGCCATCGACGTCTACAAGAGCGCTGTGG
AGTTTTCTCCAGAGAACACAGAGCTGCTGACCACATTAGG
ACTGCTGTACATGCAGCTTGGGAAGTATCAGAAAGCTTTC
GAGCATCTGGGAAACGCTCTGACCTATGACCCCAATAACT
TTAAGGCCATCCTTGCGGCTGGCAGTATGATGCAGACTCA
TGGAGATTATGACGTGGCCATGAACAAGTATCGTGTGGCG
GCATACGCTGTCCCCGAGAGCCCACCTCTCTGGAATAACA
TCGGCATGTGCTTCTTCGGCAAAAAGAAATACGTCGCTGC
CATCAGCTGTCTGAAGAGAGCGAATTATCTGTCTCCGTTT
GACTGGAAGATTCTGTATAATCTGGGTTTGGTTCACCTCA
CCATGCAGCAGTTCGCTTCCGCTTTCCACTTTCTGAGCGC
CGCCATCAACCTGCGGCCACGCATGAGTGAACTATACATG
CTGCTTGCCGTTGCTCTGACCAATCTGGATGACGCTGAAA
ACGCCCGCTGGTGAACCTGAACTTTGCAGTGTTCCTGTAT
AACCAGGGAGATAAGAAAGCCGCCCTGCTGCAGTACCAGG
AGATGGAAAGGAAAGTCAACACTCAGCTGGAGAACAGCAG
CAACACTGAGTTTGACCCTGAGCTGGTTGAAATGGCTCAG
AAGCTGGGCGGTGCTTTACAAGCGGGCGAAAACCTGTACT
GGAGCAAACCAGGCAAAGACGGCAAAACCAGCCAGCGCAG
CTCCTCCAGCAAACCCAGCGGCTCACAGCAGCCCCTGGGC
ACCAACCAGGCTCTGGGTCAGGCCATGTCTTCAGCCGCAG
GATTCAGCAAGAGCATGCAGATCAGCGCAGAGGCGGATGT
GAGCAGAGCGCCATCTCCTCCTGCTGGAGACCCGGAGGAT
GAGGATGAGGTGGAGGATGCAGCCGGACCAGCCAAACCCA
AAGACAAGAAGGGCAGAGCTAAACCTGTGGCTGAATAGAG
CACAGATTACAAAAGGCCAAGGTGTTGTCTATAACTTATG
AATGTACAGAGTTGATGCTCAGCGCAGGTTACAATCACTG
ATCTTTAGATGCTTGAATGATGTCAAAGGGTCAGTTCACC
AAAAAAAGATCCCTTTAATCATCAAAACTTATTTGAGTTC
TTCTGTTGAACACAAAAGATGTTTTGAAGAATGCTGGTAC
AGTATGTAGCACGCATTTACTTTTATAGTAATTTCTATTT
AAGTCAATTGCAATCAACATTTTTCAAAGTATCTTCTTTT
GCGTTCAACAGAAGAAAGAAACTCGTAAAGGTTTAAAACC
ACATGAGGGAGAGTAAATGATGAGGTGATTTTCATTGTTG
GGTGAACTGTCCCTTTAATGTAGATACATGTAGTTGTGTT
GCATTTGAACACTTTGTATGACACTATACAATAAGGTTAC
ATTAGCTAACATTGAACTAAAACTGTAATTCAACTTGTTC
CAAACCTGTTTCTATTTATTCTGTTGAGCACAAATGAAGA
TATTTACAACAATGTGGAAAACGGGCAGCAATTAACATCC
CTGGTGATTTGTTTTTCTATTGACTTCACTATGGAAGTGA
ATGGCTACCAGTTTCCAACATTCTTCAGAATATCTTCTGT
GTTTAGTGGAAAAAAGAAACTCATACAGGTTTGGATCCAC
TTGAGGGAGAGTAAATATGTACATTTTTATTTTGAGTGAA
CTATTCCTTTAATCTTAATAAATGTTAATTCCAACATTTA
CTAA

OTTDART00000038727 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000038727|OTTDARG00000028443|ZDB-GENE-060126-2 bbs4|OTTDARP00000032399 bbs4-003 LG_ BX957346.14 Danio rerio protein_coding KNOWN, 2324 bp
AAGAGAGAAGCGCGATGGCTGACGACGCTATGAGAACGGA
TGTTCAGCTGCCGGTGGCCACCGAGCTCAAGAAACCTCGT
CTGAAGAAAGCTCCTGAGCTTCCCATCCTGGAGAAAAGAA
ACTGGCTCATACATCTGCATTATATCCGCAAGGATTATGA
GACCTGCAAGGCTATTGTTAAAGAACAGCTGCATGAAACT
CAAGGCATGTGTGAATATGCTGTGTATGTGCAAGCTCTGA
TCATGCGGTTAGAAGGGAAGATTCAGGAGTCTCTGGAGTT
GTTTCAGAGTTGTGCCATCATTAACCCCACAAGCTCAGAC
AACCTCAAACAAGTGGCCCGATCGCTTTTCCTGTTAGGGA
AGCACAAAGCTGCCATTGAGGTTTATAATGAAGCTGCACG
TCTCAATCAGAAAGACTGGGAGATCAGCCATAATCTGGGC
GTTTGCTACATCTACACCAAAGACTTCAGGAGTGCAGAAG
AGCAGTTAAACTTGGCATTACAGCTGAATAAACACGATCT
GACCTACATGATGCTGGGAAAAATACACTTACTGCAGGGG
GACACAGAGAAAGCCATCGACGTCTACAAGAGCGCTGTGG
AGTTTTCTCCAGAGAACACAGAGCTGCTGACCACATTAGG
ACTGCTGTACATGCAGCTTGGGAAGTATCAGAAAGCTTTC
GAGCATCTGGGAAACGCTCTGACCTATGACCCCAATAACT
TTAAGGCCATCCTTGCGGCTGGCAGTATGATGCAGACTCA
TGGAGATTATGACGTGGCCATGAACAAGTATCGTGTGGCG
GCATACGCTGTCCCCGAGAGCCCACCTCTCTGGAATAACA
TCGGCATGTGCTTCTTCGGCAAAAAGAAATACGTCGCTGC
CATCAGCTGTCTGAAGAGAGCGAATTATCTGTCTCCGTTT
GACTGGAAGATTCTGTATAATCTGGGTTTGGTTCACCTCA
CCATGCAGCAGTTCGCTTCCGCTTTCCACTTTCTGAGCGC
CGCCATCAACCTGCGGCCACGCATGAGTGAACTATACATG
CTGCTTGCCGTTGCTCTGACCAATCTGGATGACGCTGAAA
ACGCCCGCTGGTGAACCTGAACTTTGCAGTGTTCCTGTAT
AACCAGGGAGATAAGAAAGCCGCCCTGCTGCAGTACCAGG
AGATGGAAAGGAAAGTCAACACTCAGCTGGAGAACAGCAG
CAACACTGAGTTTGACCCTGAGCTGGTTGAAATGGCTCAG
AAGCTGGGCGGTGCTTTACAAGCGGGCGAAAACCTGTACT
GGAGCAAACCAGGCAAAGACGGCAAAACCAGCCAGCGCAG
CTCCTCCAGCAAACCCAGCGGCTCACAGCAGCCCCTGGGC
ACCAACCAGGCTCTGGGTCAGGCCATGTCTTCAGCCGCAG
GATTCAGCAAGAGCATGCAGATCAGCGCAGAGGCGGATGT
GAGCAGAGCGCCATCTCCTCCTGCTGGAGACCCGGAGGAT
GAGGATGAGGTGGAGGATGCAGCCGGACCAGCCAAACCCA
AAGACAAGAAGGGCAGAGCTAAACCTGTGGCTGAATAGAG
CACAGATTACAAAAGGCCAAGGTGTTGTCTATAACTTATG
AATGTACAGAGTTGATGCTCAGCGCAGGTTACAATCACTG
ATCTTTAGATGCTTGAATGATGTCAAAGGGTCAGTTCACC
AAAAAAAGATCCCTTTAATCATCAAAACTTATTTGAGTTC
TTCTGTTGAACACAAAAGATGTTTTGAAGAATGCTGGTAC
AGTATGTAGCACGCATTTACTTTTATAGTAATTTCTATTT
AAGTCAATTGCAATCAACATTTTTCAAAGTATCTTCTTTT
GCGTTCAACAGAAGAAAGAAACTCGTAAAGGTTTAAAACC
ACATGAGGGAGAGTAAATGATGAGGTGATTTTCATTGTTG
GGTGAACTGTCCCTTTAATGTAGATACATGTAGTTGTGTT
GCATTTGAACACTTTGTATGACACTATACAATAAGGTTAC
ATTAGCTAACATTGAACTAAAACTGTAATTCAACTTGTTC
CAAACCTGTTTCTATTTATTCTGTTGAGCACAAATGAAGA
TATTTACAACAATGTGGAAAACGGGCAGCAATTAACATCC
CTGGTGATTTGTTTTTCTATTGACTTCACTATGGAAGTGA
ATGGCTACCAGTTTCCAACATTCTTCAGAATATCTTCTGT
GTTTAGTGGAAAAAAGAAACTCATACAGGTTTGGATCCAC
TTGAGGGAGAGTAAATATGTACATTTTTATTTTGAGTGAA
CTATTCCTTTAATCTTAATAAATGTTAATTCCAACATTTA
CTAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations