Transcript

smarcb1b-003

ID

ZDB-TSCRIPT-090929-18723

Name

smarcb1b-003 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

smarcb1b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000132254 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000132254.2|gene_biotype:protein_coding|ENSDARG00000011594.10 transcript_biotype:retained_intron gene_symbol:smarcb1b cdna chromosome:GRCz11:21:15601249:15607231:1
CTCTCATTGTGTTGTGTTCGCAAAGATGGCGTTGAGTAAA
ACATTTGGACAAAAACCAATAAAATTTCAACTCGAAGAAG
ATGGAGATTTTTACATGATAGGTTCAGAGGTTGGCAACTA
CCTGCGTATGTTCAGAGGCTCCTTATATAAGCGATACCCT
TCTTTATGGAGACGCCTTGCATCCGTTGAGGAGAGGAAGA
AGATTGTAGCGTCATCACACGGTAAGTGATTCCTTTTCAA
CAATTAGGTCCAGAAAGCAGCTATAAGCAATCCACACCTT
ATAATCTCCTAGTCCTGCTTCTGGACAGCAGTTTGTGCAG
TGTTGTTTTTGTGTTAGATCATGGTTACACACCTTTAGCC
ACCAGTGTCACCCTGCTGAAGGCTTCTGAATGTGAGGAGA
TCTTCGAGGGTAATGATGAGAAATACAAAGCCGTGTCCAT
CAGCACAGAGCCTCCGGCATATCTCAGGGAGCAGAAGGCG
AAGAGGAACAGTCAATGGGTGCCCACCCTGCCCAACAGCT
CTCACCACCTAGATGCCGTGCCTTGTTCCACCACTATCAA
CAGAAACCGAATGGGACGTGACAAAAAGAGGACCTTTCCA
TTATGTTTCGATGAC

OTTDART00000038333 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038333|OTTDARG00000028206|ZDB-GENE-991008-16 smarcb1b|no_translation smarcb1-003 LG_ CR936477.18 Danio rerio protein_coding KNOWN, 615 bp
CTCTCATTGTGTTGTGTTCGCAAAGATGGCGTTGAGTAAA
ACATTTGGACAAAAACCAATAAAATTTCAACTCGAAGAAG
ATGGAGATTTTTACATGATAGGTTCAGAGGTTGGCAACTA
CCTGCGTATGTTCAGAGGCTCCTTATATAAGCGATACCCT
TCTTTATGGAGACGCCTTGCATCCGTTGAGGAGAGGAAGA
AGATTGTAGCGTCATCACACGGTAAGTGATTCCTTTTCAA
CAATTAGGTCCAGAAAGCAGCTATAAGCAATCCACACCTT
ATAATCTCCTAGTCCTGCTTCTGGACAGCAGTTTGTGCAG
TGTTGTTTTTGTGTTAGATCATGGTTACACACCTTTAGCC
ACCAGTGTCACCCTGCTGAAGGCTTCTGAATGTGAGGAGA
TCTTCGAGGGTAATGATGAGAAATACAAAGCCGTGTCCAT
CAGCACAGAGCCTCCGGCATATCTCAGGGAGCAGAAGGCG
AAGAGGAACAGTCAATGGGTGCCCACCCTGCCCAACAGCT
CTCACCACCTAGATGCCGTGCCTTGTTCCACCACTATCAA
CAGAAACCGAATGGGACGTGACAAAAAGAGGACCTTTCCA
TTATGTTTCGATGAC

Related Transcripts

Transcripts related to smarcb1b

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	smarcb1b-202 (1) Ensembl	Ensembl	831 nt	Select Tool
mRNA	smarcb1b-203 (1) Ensembl	Ensembl	850 nt	Select Tool
mRNA	smarcb1b-206 (1) Ensembl	Ensembl	1,547 nt	Select Tool
mRNA	smarcb1b-207 (1) Ensembl	Ensembl	4,253 nt	Select Tool ZFIN BLAST
ncRNA	smarcb1b-003	Ensembl	615 nt
ncRNA	smarcb1b-005 (1) Ensembl	Ensembl	457 nt	Select Tool
ncRNA	smarcb1b-006 (1) Ensembl	Ensembl	645 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations