Transcript

zfyve21-004

ID

ZDB-TSCRIPT-090929-17968

Name

zfyve21-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

zfyve21 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000074738 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000074738.6|gene_biotype:protein_coding|ENSDARG00000027887.10 transcript_biotype:retained_intron gene_symbol:zfyve21 cdna chromosome:GRCz11:13:43650393:43659233:1
CTGTTTTTCTCTATTAATTACATATTTATTGTTGTTCGAC
AGAAAGAAGAAGCTCAGACAGGTTTGGAACAAATGAAGGA
TGAGTAAATGATTGCAGAATTCACCATTACATGCAATAAA
ATAAAACCCTACTAAACACTAACATGGTTGTTTATTTATG
TGAAAATTGTTGTCAGGCACACCAGTTAGTGTTTATATTG
TAAACTTAAAATGGTCTTGAATTGCAGGAGGAACATTTGT
GGTCAAAGTCGGTTCTTCAGAGAAATCAGAAACTATGGTT
TGCCGTTTGTCCAATAATCACAGATATCTCTTCCTAGATG
GCAACAGTCATTTTGAAGTGGAGCTGTCTCGCATTTCCAG
CATGCAGGTTTTGACTGAGGGATCGACCCCTGGAGGTGGT
ACGCTCCGGGCCAGCGGGATGGTGCTTCAGTACAAGCCAC
CGGGATCTCTAGACCTTCAGCAGCTCAATATGGACACTGC
TGATGACAAGCGCATCGCGTCTGCCTGGCTCGCAGCCATG
CACAAAGCTGCCAAACTGTTGTATGAGTCAAAGGACCAGT
GAAATGCCCGAAAAAGCACACGTCTGGAGACGAAGAGGGA
TGGACAGAACAGAACAGAAAGGAGGAGAGAGTGAGAGATG
GAGAGATCCAAACCAAGTATTATGTGTTATTCAGTCTTTC
TTGTACTCTAAGATGCTTGTATGATTTCTATTCAGTCTTT
TGCTTCTACTCCCTGCCAAGACAGACCAGATTTACTTACA
ACCCTCTCTGTCTATGCCAAGGGGAGGACCAAGATTTTGA
CGATTCTCGTGCAATATGGACATGTATGATAATATATATA
AACGCACCATTTAACAGATGCTTTAAGTGTAGTCTCACGT
ATCAAAGTTTTGTAAACAAAATATATTTTGTCAGATATTC
TTATTTTA

OTTDART00000037559 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000037559|OTTDARG00000027782|ZDB-GENE-030131-1296 zfyve21|no_translation zfyve21-004 LG_ BX957309.6 Danio rerio protein_coding KNOWN, 928 bp
CTGTTTTTCTCTATTAATTACATATTTATTGTTGTTCGAC
AGAAAGAAGAAGCTCAGACAGGTTTGGAACAAATGAAGGA
TGAGTAAATGATTGCAGAATTCACCATTACATGCAATAAA
ATAAAACCCTACTAAACACTAACATGGTTGTTTATTTATG
TGAAAATTGTTGTCAGGCACACCAGTTAGTGTTTATATTG
TAAACTTAAAATGGTCTTGAATTGCAGGAGGAACATTTGT
GGTCAAAGTCGGTTCTTCAGAGAAATCAGAAACTATGGTT
TGCCGTTTGTCCAATAATCACAGATATCTCTTCCTAGATG
GCAACAGTCATTTTGAAGTGGAGCTGTCTCGCATTTCCAG
CATGCAGGTTTTGACTGAGGGATCGACCCCTGGAGGTGGT
ACGCTCCGGGCCAGCGGGATGGTGCTTCAGTACAAGCCAC
CGGGATCTCTAGACCTTCAGCAGCTCAATATGGACACTGC
TGATGACAAGCGCATCGCGTCTGCCTGGCTCGCAGCCATG
CACAAAGCTGCCAAACTGTTGTATGAGTCAAAGGACCAGT
GAAATGCCCGAAAAAGCACACGTCTGGAGACGAAGAGGGA
TGGACAGAACAGAACAGAAAGGAGGAGAGAGTGAGAGATG
GAGAGATCCAAACCAAGTATTATGTGTTATTCAGTCTTTC
TTGTACTCTAAGATGCTTGTATGATTTCTATTCAGTCTTT
TGCTTCTACTCCCTGCCAAGACAGACCAGATTTACTTACA
ACCCTCTCTGTCTATGCCAAGGGGAGGACCAAGATTTTGA
CGATTCTCGTGCAATATGGACATGTATGATAATATATATA
AACGCACCATTTAACAGATGCTTTAAGTGTAGTCTCACGT
ATCAAAGTTTTGTAAACAAAATATATTTTGTCAGATATTC
TTATTTTA

Related Transcripts

Transcripts related to zfyve21

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	zfyve21-204 (1) Ensembl	Ensembl	649 nt	Select Tool ZFIN BLAST
mRNA	zfyve21-201 (1) Ensembl	Ensembl	1,447 nt	Select Tool ZFIN BLAST
mRNA	zfyve21-202 (1) Ensembl	Ensembl	1,418 nt	Select Tool ZFIN BLAST
mRNA	zfyve21-206 (1) Ensembl	Ensembl	407 nt	Select Tool ZFIN BLAST
ncRNA	zfyve21-004	Ensembl	928 nt
ncRNA	zfyve21-005 (1) Ensembl	Ensembl	835 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations