Transcript

smarca5-201

ID
ZDB-TSCRIPT-090929-16762
Name
smarca5-201 Nomenclature History
Previous Names
  • smarca5-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000123972 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000123972.3|gene_biotype:protein_coding|ENSDARG00000052348.7 transcript_biotype:protein_coding gene_symbol:smarca5 cdna chromosome:GRCz11:1:52792439:52820954:1
GTTTTGCGGGAACGGTGTCAACAGAAAAGCCGGGGACCGT
GAATGACGCGTGGTGCGCTTGCTCAATTTGGGCAATATTT
TGAAACTTTCCAATCAAACCAATATACTTTTTCGGCTTAT
CTGACATATTTTTAACGGAAAAACTCGGATCCATCGCGAA
ATAACGGAATTATCCAGCCTATCATGTCACAAACAGAAAG
CAGCATGGAGCAGCAGCGGGAAGAAGAGCCGAGCCAACTC
GACCCGGCCGGTCCGGCAGAGGATGATACTTCAGAAAATG
GCCATGATGAAGCATCAGATACAGCTATGGATAGTGAAGC
ACAGTCGTCATCACCTCCCTCAGCAAAGGGAAAGGACCTG
CTGGGTGGATATGAGGAAAAAGTGCAAACAGACCGGACCA
ACAGATTTGAGTACCTCTTGAAGCAGACAGAAGTGTTTGC
TCATTTCATTCAACCAGCAGCCCAGAAGACCCCAACTTCA
CCTCTGAAGATGAAGCCTGGCCGTCCTCGTATTAAAAAAG
ATGAGAAGCAGAACCTGCTGTCTGCTGGAGATAACCGCCA
TCGTCGGACGGAGCAGGAGGAGGATGAGGAGCTGCTAAGT
GAGAACAGTAAAGCCACCAGTGTCTGCACACGTTTTGATG
ACTCTCCTTCCTATGTGAAAACCGGTAAACTGAGAGACTA
CCAGGTCCGTGGACTGAACTGGCTCATTTCCCTTTATGAA
AATGGAATTAATGGAATCCTTGCTGATGAAATGGGTCTTG
GTAAGACCCTCCAGACCATCTCTCTGCTGGGCTACATGAA
GCACTATAGAAACATTCCTGGACCCCACATGGTTCTGGTG
CCCAAATCCACCCTGTATAACTGGATGAATGAGTTCAAGC
GTTGGGTTCCCTCCCTAAAAGCCGTCTGCCTCATCGGGGA
CAGGGAGGAAAGAACGGCTTTTATCCGCGACACACTGCTG
CCTGGCGAATGGGATGTGTGCGTTACCTCTTACGAGATGC
TCATTATCGAGAGAGCCGTCTTCAAAAAGTTCAACTGGAG
ATACCTGGTTATTGATGAGGCTCACCGTATCAAGAACGAG
AAGTCCAAGCTTTCCGAGATCGTGCGAGAGTTCAAGACTA
CAAATCGATTGCTGCTGACTGGAACCCCACTGCAGAACAA
CCTTCATGAGCTGTGGGCGCTGCTCAACTTCCTGCTGCCA
GATGTTTTCAACTCCTCCGAGGATTTTGATGCCTGGTTTG
ACACCAACAACTGTCTGGGTGACACAAAGTTGGTGGAACG
TTTGCATACTGTTCTGCGTCCATTCCTGCTGAGACGTATC
AAAGCGGATGTGGAGAAGTCTTTACTTCCCAAAAAGGAAA
TCAAGATATATGTTGGGCTCAGCAAGATGCAGAGAGAATG
GTACACCAAGATTTTGATGAAGGACATTGACATTCTGAAC
TCTGCTGGCAAGATGGACAAAATGCGTCTGCTGAACGTGC
TGATGCAGCTGAGGAAATGCTGCAATCATCCCTACCTGTT
CGACGGAGCGGAGCCTGGCCCGCCATACACCACTGATCTC
CACCTGGTGGTCAACAGCGGGAAGATGGTGGTGCTGGACA
AGCTGCTGCCCAAGCTCAAAGAGCAAGGTTCTCGTGTGTT
GATCTTCAGTCAGATGACCAGGGTGCTGGACATTCTGGAG
GATTATTGTATGTGGCGTAACTATGGTTACTGTAGGCTCG
ATGGACAGACTCCTCACGAGGAGCGACAGATTTCCATCAA
TGCCTTCAACGAGCCCAACAGCTCCAAGTTTCTGTTCATG
TTGAGCACCAGAGCAGGAGGACTCGGCATCAATCTGGCCA
CCGCAGACGTGGTCATCATCTACGACTCTGACTGGAATCC
TCAAGTGGATCTTCAGGCTATGGATCGTGCTCACAGGATT
GGTCAAAAGAAACAAGTGCGGGTTTTCCGTTTCATCACCG
ACAATACAGTTGAGGAAAGAATTGTCGAGCGTGCAGAAAT
GAAGCTCCGCTTGGACTCTATTGTCATTCAACAAGGCAGA
CTGGTTGATCCTAGCATGAACAAACTGGGCAAAGACGAGA
TGCTTTCCATCATTCGGCACGGTGCCACTCACGTGTTTGC
CTCAAAAGAGAGCGAGATCACAGATGAGGATATTGATGGC
ATTTTGGAGAGGGGAGAGCGGAAGACCATGGAGATGAAGG
AGAAGATGGCCAATCTTGGAGAAGGCTCTCTGAGAAACTT
CACCATGGACACAGAGAACAGCGTGTATAACTTTGAGGGT
GAAGATTACAGAGAAAAGAAGAAGGTCGTCACTAACTGGA
TTGAGCCACCCAAGAGAGAGCGTAAGGCCAACTACGCTGT
AGATGCCTACTTTCGAGAAGCCCTGCGCGTCAGCGAGCCC
AAAGCACCAAAGGCTCCACGTCCTCCCAAACAGCCCAATG
TTCAGGACTTTCAGTTCTTTCCACCTCGGCTCTTTGAGCT
GCTGGAGAAGGAGATCCTCTATTACAGGAAGACTATTGGC
TATAAGGTGCCAAGAAACCCTGATCTGCCCAACTCTGCTG
AAATGCAGAAAGAGGAGCAGGCCAAGATTGACGAAGCTGA
ACCACTTAATGAGGAAGAGCTGGAGGAGAAGGAGAACCTC
CTCTCACAGGGCTTTACTATCTGGACCAAGCGTGACTTTA
ACCAGTTCATTAAGGCCAACGAGAAGTGGGGACGAGATGA
CATTGAGAACATCGCTCGTGAGGTTGAGGGCAAAACCCCA
GAGGAGGTCATGGAATATTCTGCTGTGTTCTGGGAGCGCT
GCAATGAGTTGCAGGACATCGAGAAGATCATGGCTCAGAT
CGAGAGAGGAGAGGCCAGAATCCAGAGGAGGATCAGTATC
AAGAAAGCACTCGACTCGAAAATTGGCCGCTATAAGGCGC
CGTTCCATCAGCTCAGGATCTCGTACGGCACAAACAAAGG
GAAAAACTACACAGAGGAGGAGGATCGCTTTCTCATCTGC
ATGCTGCACAAACTGGGCTTCGACAAGGAGAGCGTTTACG
ATGAGCTGCGCCAGTGCATACGCAACTCGCCACAGTTCCG
CTTCGACTGGTTCCTCAAGTCTCGCACAGCCATGGAGCTT
CAGAGGAGATGCAACACACTGATCACACTCATCGAACGTG
AAAACATGGAGTTGGAAGAGCGAGAGAAAGCCGAGAAGAA
GAAGAGAGGACCGCGCACATCTTCGGCTCAGAAACGCAAG
CAGGACGGGACCCCTGATGGACGTGGCCGCAAGAAAAAGC
TGAAATTGTGAGCAGGCAGGCATTTCACACACCTCACTCG
GCGAGGAGCTTCAGTACAGCAATACTGCATTGATTGTTAC
GGGTCCCACTCATGTACTGTATGGATTTGCAGCACTGATC
CTCGCCTCTCAAGTAGCTTGGCCTTCTTAACAAGGTGTAG
AGTTGTAAATTAGGTCTCTTTTAGTTATATAATGTAACTA
CGGCTGTGCTGTCGGATGTGTTTTGTATTTATGGCTACTT
CAAATTTTTTTTTGTACCACATTCCATTTGCTTGTATCAG
TTTAATTTGCAGTCTTTACCCCCTCATTATTAGTGTCTTC
AGTATTGTATTGTCTCTGTATCCGCCATTGGAAAGTGACT
AATAAATGTGGTTTTTATAAATGCTGCTCTGTATGTTTCC
TACAAATAAATGTAATGTCTTTTGCCTTGTA

OTTDART00000036259 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000036259|OTTDARG00000027087|ZDB-GENE-021125-1 smarca5|OTTDARP00000029098 smarca5-001 LG_ CU550733.7 Danio rerio protein_coding KNOWN, 3711 bp
GTTTTGCGGGAACGGTGTCAACAGAAAAGCCGGGGACCGT
GAATGACGCGTGGTGCGCTTGCTCAATTTGGGCAATATTT
TGAAACTTTCCAATCAAACCAATATACTTTTTCGGCTTAT
CTGACATATTTTTAACGGAAAAACTCGGATCCATCGCGAA
ATAACGGAATTATCCAGCCTATCATGTCACAAACAGAAAG
CAGCATGGAGCAGCAGCGGGAAGAAGAGCCGAGCCAACTC
GACCCGGCCGGTCCGGCAGAGGATGATACTTCAGAAAATG
GCCATGATGAAGCATCAGATACAGCTATGGATAGTGAAGC
ACAGTCGTCATCACCTCCCTCAGCAAAGGGAAAGGACCTG
CTGGGTGGATATGAGGAAAAAGTGCAAACAGACCGGACCA
ACAGATTTGAGTACCTCTTGAAGCAGACAGAAGTGTTTGC
TCATTTCATTCAACCAGCAGCCCAGAAGACCCCAACTTCA
CCTCTGAAGATGAAGCCTGGCCGTCCTCGTATTAAAAAAG
ATGAGAAGCAGAACCTGCTGTCTGCTGGAGATAACCGCCA
TCGTCGGACGGAGCAGGAGGAGGATGAGGAGCTGCTAAGT
GAGAACAGTAAAGCCACCAGTGTCTGCACACGTTTTGATG
ACTCTCCTTCCTATGTGAAAACCGGTAAACTGAGAGACTA
CCAGGTCCGTGGACTGAACTGGCTCATTTCCCTTTATGAA
AATGGAATTAATGGAATCCTTGCTGATGAAATGGGTCTTG
GTAAGACCCTCCAGACCATCTCTCTGCTGGGCTACATGAA
GCACTATAGAAACATTCCTGGACCCCACATGGTTCTGGTG
CCCAAATCCACCCTGTATAACTGGATGAATGAGTTCAAGC
GTTGGGTTCCCTCCCTAAAAGCCGTCTGCCTCATCGGGGA
CAGGGAGGAAAGAACGGCTTTTATCCGCGACACACTGCTG
CCTGGCGAATGGGATGTGTGCGTTACCTCTTACGAGATGC
TCATTATCGAGAGAGCCGTCTTCAAAAAGTTCAACTGGAG
ATACCTGGTTATTGATGAGGCTCACCGTATCAAGAACGAG
AAGTCCAAGCTTTCCGAGATCGTGCGAGAGTTCAAGACTA
CAAATCGATTGCTGCTGACTGGAACCCCACTGCAGAACAA
CCTTCATGAGCTGTGGGCGCTGCTCAACTTCCTGCTGCCA
GATGTTTTCAACTCCTCCGAGGATTTTGATGCCTGGTTTG
ACACCAACAACTGTCTGGGTGACACAAAGTTGGTGGAACG
TTTGCATACTGTTCTGCGTCCATTCCTGCTGAGACGTATC
AAAGCGGATGTGGAGAAGTCTTTACTTCCCAAAAAGGAAA
TCAAGATATATGTTGGGCTCAGCAAGATGCAGAGAGAATG
GTACACCAAGATTTTGATGAAGGACATTGACATTCTGAAC
TCTGCTGGCAAGATGGACAAAATGCGTCTGCTGAACGTGC
TGATGCAGCTGAGGAAATGCTGCAATCATCCCTACCTGTT
CGACGGAGCGGAGCCTGGCCCGCCATACACCACTGATCTC
CACCTGGTGGTCAACAGCGGGAAGATGGTGGTGCTGGACA
AGCTGCTGCCCAAGCTCAAAGAGCAAGGTTCTCGTGTGTT
GATCTTCAGTCAGATGACCAGGGTGCTGGACATTCTGGAG
GATTATTGTATGTGGCGTAACTATGGTTACTGTAGGCTCG
ATGGACAGACTCCTCACGAGGAGCGACAGATTTCCATCAA
TGCCTTCAACGAGCCCAACAGCTCCAAGTTTCTGTTCATG
TTGAGCACCAGAGCAGGAGGACTCGGCATCAATCTGGCCA
CCGCAGACGTGGTCATCATCTACGACTCTGACTGGAATCC
TCAAGTGGATCTTCAGGCTATGGATCGTGCTCACAGGATT
GGTCAAAAGAAACAAGTGCGGGTTTTCCGTTTCATCACCG
ACAATACAGTTGAGGAAAGAATTGTCGAGCGTGCAGAAAT
GAAGCTCCGCTTGGACTCTATTGTCATTCAACAAGGCAGA
CTGGTTGATCCTAGCATGAACAAACTGGGCAAAGACGAGA
TGCTTTCCATCATTCGGCACGGTGCCACTCACGTGTTTGC
CTCAAAAGAGAGCGAGATCACAGATGAGGATATTGATGGC
ATTTTGGAGAGGGGAGAGCGGAAGACCATGGAGATGAAGG
AGAAGATGGCCAATCTTGGAGAAGGCTCTCTGAGAAACTT
CACCATGGACACAGAGAACAGCGTGTATAACTTTGAGGGT
GAAGATTACAGAGAAAAGAAGAAGGTCGTCACTAACTGGA
TTGAGCCACCCAAGAGAGAGCGTAAGGCCAACTACGCTGT
AGATGCCTACTTTCGAGAAGCCCTGCGCGTCAGCGAGCCC
AAAGCACCAAAGGCTCCACGTCCTCCCAAACAGCCCAATG
TTCAGGACTTTCAGTTCTTTCCACCTCGGCTCTTTGAGCT
GCTGGAGAAGGAGATCCTCTATTACAGGAAGACTATTGGC
TATAAGGTGCCAAGAAACCCTGATCTGCCCAACTCTGCTG
AAATGCAGAAAGAGGAGCAGGCCAAGATTGACGAAGCTGA
ACCACTTAATGAGGAAGAGCTGGAGGAGAAGGAGAACCTC
CTCTCACAGGGCTTTACTATCTGGACCAAGCGTGACTTTA
ACCAGTTCATTAAGGCCAACGAGAAGTGGGGACGAGATGA
CATTGAGAACATCGCTCGTGAGGTTGAGGGCAAAACCCCA
GAGGAGGTCATGGAATATTCTGCTGTGTTCTGGGAGCGCT
GCAATGAGTTGCAGGACATCGAGAAGATCATGGCTCAGAT
CGAGAGAGGAGAGGCCAGAATCCAGAGGAGGATCAGTATC
AAGAAAGCACTCGACTCGAAAATTGGCCGCTATAAGGCGC
CGTTCCATCAGCTCAGGATCTCGTACGGCACAAACAAAGG
GAAAAACTACACAGAGGAGGAGGATCGCTTTCTCATCTGC
ATGCTGCACAAACTGGGCTTCGACAAGGAGAGCGTTTACG
ATGAGCTGCGCCAGTGCATACGCAACTCGCCACAGTTCCG
CTTCGACTGGTTCCTCAAGTCTCGCACAGCCATGGAGCTT
CAGAGGAGATGCAACACACTGATCACACTCATCGAACGTG
AAAACATGGAGTTGGAAGAGCGAGAGAAAGCCGAGAAGAA
GAAGAGAGGACCGCGCACATCTTCGGCTCAGAAACGCAAG
CAGGACGGGACCCCTGATGGACGTGGCCGCAAGAAAAAGC
TGAAATTGTGAGCAGGCAGGCATTTCACACACCTCACTCG
GCGAGGAGCTTCAGTACAGCAATACTGCATTGATTGTTAC
GGGTCCCACTCATGTACTGTATGGATTTGCAGCACTGATC
CTCGCCTCTCAAGTAGCTTGGCCTTCTTAACAAGGTGTAG
AGTTGTAAATTAGGTCTCTTTTAGTTATATAATGTAACTA
CGGCTGTGCTGTCGGATGTGTTTTGTATTTATGGCTACTT
CAAATTTTTTTTTGTACCACATTCCATTTGCTTGTATCAG
TTTAATTTGCAGTCTTTACCCCCTCATTATTAGTGTCTTC
AGTATTGTATTGTCTCTGTATCCGCCATTGGAAAGTGACT
AATAAATGTGGTTTTTATAAATGCTGCTCTGTATGTTTCC
TACAAATAAATGTAATGTCTTTTGCCTTGTA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations