Transcript

scel-004

ID

ZDB-TSCRIPT-090929-15046

Name

scel-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

scel (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000147943 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000147943.2|gene_biotype:protein_coding|ENSDARG00000034677.8 transcript_biotype:retained_intron gene_symbol:scel cdna chromosome:GRCz11:9:17331502:17334523:1
TTTCATGACTTTTCATTAGAGCTTCCCTCTCAGCACAGCA
GTGTTTGTAATATGGATTTTTATGGTTCTTACAGTCGTGA
GGATTTGTCATCCTCCAAAACTGTCAGAACCGTGTACTCA
ACAATTGACAGAAATGAGTGGAGTACAGACTTAAGTCCTT
CTTACACCAGAACGTCATACACAGAAAGCAGGCCTTTTGA
ATACATGTCGGATTCTCTCACATCAAAAACTACTACGACT
GTATACTCATCACCGGAAAGGAAAGTAAATGCGAAGGACA
TCTGCACATATTGCAATCAAAGCATGTACACAGATGAAAA
GTTTATCTTGGATGACATGAACATAAACTGTCATGCAAGA
TGTTTCAAGTGTGGGGTGTGCAATACTTCACTGGGAAACC
TGAGGGCTGGGGACAGCCTGTGGGTTTACCAGTGTGCGAT
TCACTGTGCAAGCTGCTTTGGTGTCACTAAGAACAAATGG
ATGCGCTGAAACAGTTCCCACTGAAGAAGTGAGCTAATGA
AGGAGATGATGGCAAATGTGATAAAACTGCCTATACACTG
ATTAGACATGGACACGGGTCATTCGATTTATGGTGGTGGA
CTTCTATCAGATAGAGTTTGGGGTTTATTCATTGTATTAA
TAGATATTTATATACTTATACAATTACCAATACTAATAGG
ACTATTTTAAAGGAAAAATAACATTATTTTCATATATTTT
ATGACTGTATTAAATGCAGAAACACATTTGTTTACATCTG
AATGATTTTTATCAGTCAGATCTGGTTAAGCATCATTCCA
GTTAGCCTGTCTCTACTGTGCAATT

OTTDART00000034147 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000034147|OTTDARG00000021002|ZDB-GENE-030616-15 scel|no_translation scel-004 LG_ BX510646.5 Danio rerio protein_coding KNOWN, 825 bp
TTTCATGACTTTTCATTAGAGCTTCCCTCTCAGCACAGCA
GTGTTTGTAATATGGATTTTTATGGTTCTTACAGTCGTGA
GGATTTGTCATCCTCCAAAACTGTCAGAACCGTGTACTCA
ACAATTGACAGAAATGAGTGGAGTACAGACTTAAGTCCTT
CTTACACCAGAACGTCATACACAGAAAGCAGGCCTTTTGA
ATACATGTCGGATTCTCTCACATCAAAAACTACTACGACT
GTATACTCATCACCGGAAAGGAAAGTAAATGCGAAGGACA
TCTGCACATATTGCAATCAAAGCATGTACACAGATGAAAA
GTTTATCTTGGATGACATGAACATAAACTGTCATGCAAGA
TGTTTCAAGTGTGGGGTGTGCAATACTTCACTGGGAAACC
TGAGGGCTGGGGACAGCCTGTGGGTTTACCAGTGTGCGAT
TCACTGTGCAAGCTGCTTTGGTGTCACTAAGAACAAATGG
ATGCGCTGAAACAGTTCCCACTGAAGAAGTGAGCTAATGA
AGGAGATGATGGCAAATGTGATAAAACTGCCTATACACTG
ATTAGACATGGACACGGGTCATTCGATTTATGGTGGTGGA
CTTCTATCAGATAGAGTTTGGGGTTTATTCATTGTATTAA
TAGATATTTATATACTTATACAATTACCAATACTAATAGG
ACTATTTTAAAGGAAAAATAACATTATTTTCATATATTTT
ATGACTGTATTAAATGCAGAAACACATTTGTTTACATCTG
AATGATTTTTATCAGTCAGATCTGGTTAAGCATCATTCCA
GTTAGCCTGTCTCTACTGTGCAATT

Related Transcripts

Transcripts related to scel

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ottdart00000001940 (1)	Havana	2,153 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	scel-201 (1) Ensembl	Ensembl	2,316 nt	Select Tool ZFIN BLAST
mRNA	scel-202 (1) Ensembl	Ensembl	2,393 nt	Select Tool
ncRNA	scel-002 (1) Ensembl	Ensembl	696 nt	Select Tool
ncRNA	scel-003 (1) Ensembl	Ensembl	222 nt	Select Tool
ncRNA	scel-004	Ensembl	825 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations