Transcript

pikfyve-205

ID

ZDB-TSCRIPT-090929-15007

Name

pikfyve-205 Nomenclature History

Previous Names

pikfyve-002
pip5k3-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

pikfyve (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000143964 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000143964.2|gene_biotype:protein_coding|ENSDARG00000056112.7 transcript_biotype:nonsense_mediated_decay gene_symbol:pikfyve cdna chromosome:GRCz11:9:32100203:32103807:1
AGTTCTCCGATGCAAATGCTAAGTTCTACTGCCGGATCTA
CTATGCTGAAGAGTTCCATAAAATGCGGGAGGAGATCATG
GAGAGCACAGAGGATGATTTTGTGCGATCTCTTTCCCACT
GTGTCAACTGGCAGGCGCGTGGTGGGAAATCTGGTGCAGT
TTTCTATGCCACTGAAGATGATCGGTTTATTCTGAAGCAG
ATGCCCAGATTAGAGGTCCAGTCCTTTTTAGACTTTGCAC
CCCACTACTTTACGTACATCACAGGAGCGGTTCACCTAAA
GGGATGTCCAAACTCAGTCCTGGAGGGCCCATTCAGAGCA
ATTTGTGGCGACCCACAGCACTTGCTAAGATTCTGGGAGT
GTACCGCATCGGCTACAAGAACTCCCAGAACAACACTGAG
AAGAAGCTTGACCTGCTTGTGATGGAAAACCTTTTCTATG
GACGAAAGATGGCACAGGTGTTTGACCTGAAAGGATCGCT
GAGAAACAGGAACGTGAAGACGGACCAGGGAAAGGAGAGC
TGTGAGGTGGTGCTCCTAGATGAGAACCTGCTCAAACTGG
TGCATGACAATCCCCTTTATATTCGCTCGCACTGCAAGGC
CATCCTGCGTGCTGCCATCCACAGCGACGCGCTCTTCCTG
TCCAGCCACCTCATCATTGATTACTCCCTGCTGGTGGGCC
GAGACGATTCCACAGATGAGCTAGTTGTGGGGATCATAGA
TTATATCCGGACTTTCACTTGGGATAAAAAGCTGGAGATG
GTGGTCAAATCTACTGGGATTCTTGGAGGTCAAGGTAAAA
TGCCCACAGTGGTGTCACCAGAGCTGTATCGAACACGTTT
CTGTGAGGCCATGGATAAATACTTCC

OTTDART00000034104 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000034104|OTTDARG00000020725|ZDB-GENE-030131-9636 pikfyve|OTTDARP00000039031 pip5k3-002 LG_ BX530407.26 Danio rerio protein_coding KNOWN, 866 bp
AGTTCTCCGATGCAAATGCTAAGTTCTACTGCCGGATCTA
CTATGCTGAAGAGTTCCATAAAATGCGGGAGGAGATCATG
GAGAGCACAGAGGATGATTTTGTGCGATCTCTTTCCCACT
GTGTCAACTGGCAGGCGCGTGGTGGGAAATCTGGTGCAGT
TTTCTATGCCACTGAAGATGATCGGTTTATTCTGAAGCAG
ATGCCCAGATTAGAGGTCCAGTCCTTTTTAGACTTTGCAC
CCCACTACTTTACGTACATCACAGGAGCGGTTCACCTAAA
GGGATGTCCAAACTCAGTCCTGGAGGGCCCATTCAGAGCA
ATTTGTGGCGACCCACAGCACTTGCTAAGATTCTGGGAGT
GTACCGCATCGGCTACAAGAACTCCCAGAACAACACTGAG
AAGAAGCTTGACCTGCTTGTGATGGAAAACCTTTTCTATG
GACGAAAGATGGCACAGGTGTTTGACCTGAAAGGATCGCT
GAGAAACAGGAACGTGAAGACGGACCAGGGAAAGGAGAGC
TGTGAGGTGGTGCTCCTAGATGAGAACCTGCTCAAACTGG
TGCATGACAATCCCCTTTATATTCGCTCGCACTGCAAGGC
CATCCTGCGTGCTGCCATCCACAGCGACGCGCTCTTCCTG
TCCAGCCACCTCATCATTGATTACTCCCTGCTGGTGGGCC
GAGACGATTCCACAGATGAGCTAGTTGTGGGGATCATAGA
TTATATCCGGACTTTCACTTGGGATAAAAAGCTGGAGATG
GTGGTCAAATCTACTGGGATTCTTGGAGGTCAAGGTAAAA
TGCCCACAGTGGTGTCACCAGAGCTGTATCGAACACGTTT
CTGTGAGGCCATGGATAAATACTTCC

Related Transcripts

Transcripts related to pikfyve

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	pikfyve-205	Ensembl	866 nt
mRNA	pikfyve-201 (1) Ensembl	Ensembl	6,276 nt	Select Tool ZFIN BLAST
mRNA	pikfyve-202 (1) Ensembl	Ensembl	8,698 nt	Select Tool ZFIN BLAST
mRNA	pikfyve-203 (1) Ensembl	Ensembl	6,303 nt	Select Tool
mRNA	pikfyve-204 (1) Ensembl	Ensembl	6,933 nt	Select Tool
mRNA	pikfyve-206 (1) Ensembl	Ensembl	6,238 nt	Select Tool
mRNA	pikfyve-207 (1) Ensembl	Ensembl	8,813 nt	Select Tool ZFIN BLAST
mRNA	pikfyve-208 (1) Ensembl	Ensembl	8,861 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations