Transcript

sox5-201

ID
ZDB-TSCRIPT-090929-1409
Name
sox5-201 Nomenclature History
Previous Names
  • sox5-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000134595 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000134595.3|gene_biotype:protein_coding|ENSDARG00000011582.12 transcript_biotype:protein_coding gene_symbol:sox5 cdna chromosome:GRCz11:4:16982249:17055782:-1
ATGCTTACTGAGCCTGAGCTTCCTCAGGAGTTTAACAGGA
TGTCTTCCAAGCGACCAGCCTCTCCATATGGGGGAACAGA
TGGAGAGGTAGTCATGGCGACGAGCAGACAGCGATTGGAA
GATGAAGAGGTTGACGGACATGCTGTCATTCACTTGCCCC
TGAGTTCGTACTGCAGCAAGGTGTCCCCGCGATCTCCTCG
ACTACTCGACAGCCCCCCAACACTACACGCAAACATGGAT
GGCAGTAAAGGCCTGGCGCTGAGCCCCTACGCCCAGCACA
ACTCGTCTACCTCACCCAGTAAACAGCAGCAGGAGGACAG
CTCAATGAGGCCGGGCAGTGAACCCGGCTCTGCATCAGCT
CTGGGCACACCGGAGAGACGCAAGGGCAGCCTAGCTGACG
TGGTCGACACGCTCAAACAGCGCAAGATGGAGGAACTCAT
CAAGAACGAGCCAGAGGAGGCCCCCAGTATTGAGAGGCTG
TTGTCTAAGGACTGGAAGGACAAGCTATTGGCCATGGGTT
CTGGCAACTTTGGAGAGATCAAAGGCACCCCGGACAGTCT
GGCGGAGAAAGAGCGGCAGTTGATGGGGATGATCACGCAG
CTCAGCAGTCTCCGAGAGCAGTTACTGGCTGCCCACGAGG
AGCAGAAGAAACTGGCTGCTTCACAGATTGAAAAACAACG
CCAGCAAATGGAGTTAGCAAAACAGCAACAGGACCAGATT
GCACGACAACAGCAGCAACTTCTGCAGCAACAACACAAAA
TCAACCTCCTGCAGCAACAGATCCAGCAGGTCCAGGGTCA
GTTGCCTCCGCTGATGATTCCAGTGTTCCCTCCAGATCAG
AGAACTCTGGCAGCCGCTGCAGCACAACAAGGATTTCTAC
TTCCTCCTGGATTTAACTACAAACCGGGATGCAGTGAACC
TTACCCTCTACAGTTAATCCCTACGACTATGGCGGCCGCT
GCTGCGGCAACACCTGGCCTTGGTCCTCTTCAGCTGCAGC
AGTTGTATGCAGCTCAGCTAGCTGCCATGCAGGTGTCTCC
GGGGGCCAAACACAGCACAGTGCCTCAGGCCAACCTGGCA
ACCGGAACACTCTCGCCCACCAGCGGCCAGAGCGAGAAAA
ACAGAAGCACCCCACCACCAAAGCCCAAGGACGAGGGCGC
TCAGCCCTTGAATCTGTCGTCCAAGCCTAAGGCATCCGAG
AGCAAGTCACCCACCTCCCCCGCTTCCCCACAGGTCCCTG
CCCTGAAGCTGGGCCCCGGGTCCCTGAAGCACAGCGCACC
CTCCAGCATCGGAGGACCGCCATCCAGGCTCAGCTCAATA
GACCTGTTATCATCCATCACCTCTGCCGGCTACCTGAATG
ACCATGAGGCCGTGACCAAAGCTTTCCAGGAGGCCCGAAA
GATGAAAGAACAGCTAAAGAGAGAGGAGCAGGTTCTGGAC
GCCAAAGTAGCAGCAGTCAACAGCTTGAGCCTCAACAACG
GACGCTCAGAGAAGGAAAAAGCTGCTCTCGAGAGCCTGAG
CCAGCAGTTAAAACAGTCTGAAGAGAGTAAGTTCACCCAT
GCAATGATGGACTTTGGCATCAGTGGCGATTCAGATGGAA
GCCCAAGTGTGTCGGACTCGCGGATCTTCCGAGAGGCTCG
AGGGCGTGGCAGCAGTGAACCACACATCAAGCGACCCATG
AATGCCTTTATGGTCTGGGCTAAAGACGAGAGGAGAAAAA
TCCTTCAGGCCTTCCCTGACATGCATAACTCAAATATCAG
CAAGATCCTCGGTTCTCGTTGGAAGTCGATGACCAACTTG
GAAAAGCAGCCATACTATGAAGAACAGGCCCGTCTTAGTA
AGCAGCACCTAGAGAAATACCCAGACTACAAATACAAACC
ACGGCCCAAACGCACCTGTCTGGTGGATGGAAAGAAGTTG
CGCATTGGTGAATATAAGGCAATCATGCGCAATCGCAGAC
AAGAAATGCGGCAGTACTTCACTGTGGGACAGCAGGCCCA
ATTGCCTTTGTCTTCAGCAGGCGTTGTGTACCCGGGTGCT
CTCTCTATGGCGGGAATGCCCTCTCCACAGATGCCCTCTG
AGCACTCAAGCATGTCAAGTAGCCCCGAACCAGTCCCACC
CACCAGCCAAGCCTCTTATTTCAAAGAGGTGGAGCCTCGT
GTGAAGGAGGAGCTGAGAATGGACGATGGCAACGGTGATG
CCTATGATGACTTTGACTACGAGGACGATGATGGAGACTA
TGGCAGCGACAGCGAGAATCACATCACTCAGTAAACCTGC
AAATCACAACCAACTCACCAGTCACCTGGCATCTCACGTA
AACAAACTTAATTCCACCCCAGACACCGTCCAATCAGGAC
CCCTCCCGAGCCAAGCCTGATATCAACGGCAAAGCACAGG
ATCTGTCAATCAATGTGACTGTTACATGAACAGGAGGGTC
TTGTGAAGGAAGTGTAACACTTGCCTTGACTCTCGCTGAG
CGAACGTGCCGCGGCAAGTTCATATTGTATCACGAGTAAG
CTACGACAACATAGGAGAAATGACCAGTTTGTTATTGAGA
CATTTATTTCTAAGGACCTGTCAGTCGACCCGTCATAGAC
ACTTTAAAACGGTGGACCTGTTTGTTTCTAAAGAGACACT
TTTAAACAGCTTTTTTTTCTTGGTTCTATAATATTCTCAC
TCAGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGATT
TTGTTGTTTTTGTGCTACAGTTTTAATAGAGAAAAAAAGA
CGTTTATTTTCCTCTTCACCGTAAAGCACCTGACAAGAGT
AAAACGACAAACATTTTGCTTTTTTTTTCTCTTTGGCTTG
CTATTAGCTAAATCTTTCTATCATCCTCACGCCCATGTCC
TCTCACTCAAAGATTTCTTTTCTTTTGGATGGAAGGGAGA
ATTCGCGTCCCTTCACTCAGGAGTTCGGACACCGCTGGAT
GACAGACAATCCCTCCGTCCTCACATCTTTTCCTCTTGAC
ACACTTTTACTGTTCCTTTCTCTTCCTCTTCTGGGGAAAC
TTTGGATGTTGACGTCTCTCTCAGGTGTGGAGACAAACTT
TATGAGATAGCACAAACCTTGTGTTTGGTGAACAGCTGAC
ATGGCGATGGTTATGGTGGAGAGTGAAGCCTCGAGCAGAA
TTATTGTATGCGTGCACATTTCTTTATGTTTGTGTGTGTG
TGTGTGTGTGTTTGGATGAACGCGGCTTTTGCTAGGTTTT
AAGTTAATTTTTATTACATATGGACCGTTGATGTGCTGGT
CATGTGAACATTTACAAAAAAAAATAATAATATTCAATGC
GTACGATTCATGCAGAAGAAACCCAAAAAAGAACACTGCA
TTTCCTTATTTTTCTTTATGTTTTTGTTTTGTTTTTCCTC
ATTTTTTCTTTCATTTTCTTCCGTCTTTCTCTTTGTCTCC
CTGAACAACTTGTTTTTGTCATCACAGGGTGCACCTCAAC
CCGAAAGCAAAAGAGGAGACTCGCAGAGAAAAGCTCTCTA
GAGAAGAGTCTGTGTTTGAATGGAGTATTGAAGGCGGAGA
ATAGAGTTCCCACAAGCCCCAGTGTTCAAAGCACAGCTCT
GAGAGAAAGCAGGGATCTCTGTACAAGACAAGCACGAGTG
TGCGTTTCAATCAGCGCCCCTTAATATATCACACATCTCT
CTCGTCCTCCGCAGGGGTTTGTGTTCCGTCTCTCTCCTCT
CTTTATTTCCTATCTATCACTTGGTTGATCAGTGCAGAGG
AGTCTGTGAGTCGTGCCATCAGTCATCGCTCTCTGTGTGG
CTCTGACTGACCCACTCCATCTTACTGCACCTGTGTGGCG
GCTGTTGGCACGGCGATGGCGTTTGATTGACGGCTGCCCT
AACTGTAACTACTCTGCCAGCCTGTCTCTGGCCTGGTGTG
GGCATAAGCGGGCAGCTGGATGAGAGAGACACACAAGCTG
TTAGGTGAACAGCGGCCAGACTCCTGCCATTAATATCTCC
GTGTTCTCCCTTTACGTCCACCCAAAATCCGTCCACTCAC
AGCACATATCAAACTCTATACTTTTTTTTTGGCCTACTTG
AGATTGTTTTGGAAGAAAAAGTTCCAGGTACTCTGATGCC
AGCAGCGCTAGCAAATTGATGACCGACGCTCGTCTCTGTC
TAGTTCATTGGTTTCAATGAGGCCGTCTCGTCTCTGTTTG
TATCTGTGTTTTGCCTCCATGTCAACGTCACTCTGCTGTT
GAGGTTGAGAGGAGCTGTTTCAGACTTTGCATGTCAATGT
TTTAGTTTGTATTTGCAAATACTGTATTTTATTTTTATCA
TTAAAACTGCCTCTAGTGTAATAATATTATTAACAATAAT
TATAAAAATAGGCAGCATTTCCTGAGTTTAGTAAGTTATG
TACAGTATAATTTATTATTTTCCTCCAGTTGGATTTTTTT
ATGATCGTATGGAAACTGCGCTTGATAAAGCATTATATTT
AGCTGGGTAGGTATTTAGATCTAATTATTATGTTTCGTTT
TGTTTTTGTTACTGTTTTTTTGTTTGTTTTTTGTTTTTTT
ATCCTGTTCTGACGCTGGTATATTTCTGAAAAGTGGTCAC
GGTGAACTGCTGATATGAAGGAAAAGAGACATTTCTCTTT
TTTCATTTTCTTTTTCTCCTCCGTGCATCGTTCATGAACT
CCAAACACATTTCTTAAAGCACTAGGACTCTGGACACTCG
GAGACAAACATAAGAAGAACCTGATATTTTTATTTGTAAT
GGTTTATGTATAATGTGAAGTTTCCTATCTGTTAATTCTC
TTTTTCTTTTGATAAAGAAAACAGCTATATTATACCCCAA
CTGCTATTGAACAGAAAGAGCGTTGATCTTGTTTACTGAT
ATTTGTCATCCTCTCTCTTACATTTCATTGGAACATCATT
GGCTTGGACAAATGCTTTTGTTTACCTGTTGTGTTGAATT
ATAGTACAAATCGAGGATCGTTCACCCCCCAAAAATGACA
AAACATGTATCACTTACTTTCTTCTGCAGAACGAACCAGT
TGAAGAGACGTTGAAGCTCTAAAAAGAAAGAAAAGCATCA
TTAAAATGTGCTGCATTCAACTGTGCTACATATAGTCCAA
TAAATCTATATGATTGCT

OTTDART00000009155 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000009155|OTTDARG00000008038|ZDB-GENE-000607-13 sox5|OTTDARP00000007890 DKEY-215A8.1-001 LG_none BX649261.3,CR792413.5 Danio rerio protein_coding NOVEL, 5138 bp
ATGCTTACTGAGCCTGAGCTTCCTCAGGAGTTTAACAGGA
TGTCTTCCAAGCGACCAGCCTCTCCATATGGGGGAACAGA
TGGAGAGGTAGTCATGGCGACGAGCAGACAGCGATTGGAA
GATGAAGAGGTTGACGGACATGCTGTCATTCACTTGCCCC
TGAGTTCGTACTGCAGCAAGGTGTCCCCGCGATCTCCTCG
ACTACTCGACAGCCCCCCAACACTACACGCAAACATGGAT
GGCAGTAAAGGCCTGGCGCTGAGCCCCTACGCCCAGCACA
ACTCGTCTACCTCACCCAGTAAACAGCAGCAGGAGGACAG
CTCAATGAGGCCGGGCAGTGAACCCGGCTCTGCATCAGCT
CTGGGCACACCGGAGAGACGCAAGGGCAGCCTAGCTGACG
TGGTCGACACGCTCAAACAGCGCAAGATGGAGGAACTCAT
CAAGAACGAGCCAGAGGAGGCCCCCAGTATTGAGAGGCTG
TTGTCTAAGGACTGGAAGGACAAGCTATTGGCCATGGGTT
CTGGCAACTTTGGAGAGATCAAAGGCACCCCGGACAGTCT
GGCGGAGAAAGAGCGGCAGTTGATGGGGATGATCACGCAG
CTCAGCAGTCTCCGAGAGCAGTTACTGGCTGCCCACGAGG
AGCAGAAGAAACTGGCTGCTTCACAGATTGAAAAACAACG
CCAGCAAATGGAGTTAGCAAAACAGCAACAGGACCAGATT
GCACGACAACAGCAGCAACTTCTGCAGCAACAACACAAAA
TCAACCTCCTGCAGCAACAGATCCAGCAGGTCCAGGGTCA
GTTGCCTCCGCTGATGATTCCAGTGTTCCCTCCAGATCAG
AGAACTCTGGCAGCCGCTGCAGCACAACAAGGATTTCTAC
TTCCTCCTGGATTTAACTACAAACCGGGATGCAGTGAACC
TTACCCTCTACAGTTAATCCCTACGACTATGGCGGCCGCT
GCTGCGGCAACACCTGGCCTTGGTCCTCTTCAGCTGCAGC
AGTTGTATGCAGCTCAGCTAGCTGCCATGCAGGTGTCTCC
GGGGGCCAAACACAGCACAGTGCCTCAGGCCAACCTGGCA
ACCGGAACACTCTCGCCCACCAGCGGCCAGAGCGAGAAAA
ACAGAAGCACCCCACCACCAAAGCCCAAGGACGAGGGCGC
TCAGCCCTTGAATCTGTCGTCCAAGCCTAAGGCATCCGAG
AGCAAGTCACCCACCTCCCCCGCTTCCCCACAGGTCCCTG
CCCTGAAGCTGGGCCCCGGGTCCCTGAAGCACAGCGCACC
CTCCAGCATCGGAGGACCGCCATCCAGGCTCAGCTCAATA
GACCTGTTATCATCCATCACCTCTGCCGGCTACCTGAATG
ACCATGAGGCCGTGACCAAAGCTTTCCAGGAGGCCCGAAA
GATGAAAGAACAGCTAAAGAGAGAGGAGCAGGTTCTGGAC
GCCAAAGTAGCAGCAGTCAACAGCTTGAGCCTCAACAACG
GACGCTCAGAGAAGGAAAAAGCTGCTCTCGAGAGCCTGAG
CCAGCAGTTAAAACAGTCTGAAGAGAGTAAGTTCACCCAT
GCAATGATGGACTTTGGCATCAGTGGCGATTCAGATGGAA
GCCCAAGTGTGTCGGACTCGCGGATCTTCCGAGAGGCTCG
AGGGCGTGGCAGCAGTGAACCACACATCAAGCGACCCATG
AATGCCTTTATGGTCTGGGCTAAAGACGAGAGGAGAAAAA
TCCTTCAGGCCTTCCCTGACATGCATAACTCAAATATCAG
CAAGATCCTCGGTTCTCGTTGGAAGTCGATGACCAACTTG
GAAAAGCAGCCATACTATGAAGAACAGGCCCGTCTTAGTA
AGCAGCACCTAGAGAAATACCCAGACTACAAATACAAACC
ACGGCCCAAACGCACCTGTCTGGTGGATGGAAAGAAGTTG
CGCATTGGTGAATATAAGGCAATCATGCGCAATCGCAGAC
AAGAAATGCGGCAGTACTTCACTGTGGGACAGCAGGCCCA
ATTGCCTTTGTCTTCAGCAGGCGTTGTGTACCCGGGTGCT
CTCTCTATGGCGGGAATGCCCTCTCCACAGATGCCCTCTG
AGCACTCAAGCATGTCAAGTAGCCCCGAACCAGTCCCACC
CACCAGCCAAGCCTCTTATTTCAAAGAGGTGGAGCCTCGT
GTGAAGGAGGAGCTGAGAATGGACGATGGCAACGGTGATG
CCTATGATGACTTTGACTACGAGGACGATGATGGAGACTA
TGGCAGCGACAGCGAGAATCACATCACTCAGTAAACCTGC
AAATCACAACCAACTCACCAGTCACCTGGCATCTCACGTA
AACAAACTTAATTCCACCCCAGACACCGTCCAATCAGGAC
CCCTCCCGAGCCAAGCCTGATATCAACGGCAAAGCACAGG
ATCTGTCAATCAATGTGACTGTTACATGAACAGGAGGGTC
TTGTGAAGGAAGTGTAACACTTGCCTTGACTCTCGCTGAG
CGAACGTGCCGCGGCAAGTTCATATTGTATCACGAGTAAG
CTACGACAACATAGGAGAAATGACCAGTTTGTTATTGAGA
CATTTATTTCTAAGGACCTGTCAGTCGACCCGTCATAGAC
ACTTTAAAACGGTGGACCTGTTTGTTTCTAAAGAGACACT
TTTAAACAGCTTTTTTTTCTTGGTTCTATAATATTCTCAC
TCAGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGATT
TTGTTGTTTTTGTGCTACAGTTTTAATAGAGAAAAAAAGA
CGTTTATTTTCCTCTTCACCGTAAAGCACCTGACAAGAGT
AAAACGACAAACATTTTGCTTTTTTTTTCTCTTTGGCTTG
CTATTAGCTAAATCTTTCTATCATCCTCACGCCCATGTCC
TCTCACTCAAAGATTTCTTTTCTTTTGGATGGAAGGGAGA
ATTCGCGTCCCTTCACTCAGGAGTTCGGACACCGCTGGAT
GACAGACAATCCCTCCGTCCTCACATCTTTTCCTCTTGAC
ACACTTTTACTGTTCCTTTCTCTTCCTCTTCTGGGGAAAC
TTTGGATGTTGACGTCTCTCTCAGGTGTGGAGACAAACTT
TATGAGATAGCACAAACCTTGTGTTTGGTGAACAGCTGAC
ATGGCGATGGTTATGGTGGAGAGTGAAGCCTCGAGCAGAA
TTATTGTATGCGTGCACATTTCTTTATGTTTGTGTGTGTG
TGTGTGTGTGTTTGGATGAACGCGGCTTTTGCTAGGTTTT
AAGTTAATTTTTATTACATATGGACCGTTGATGTGCTGGT
CATGTGAACATTTACAAAAAAAAATAATAATATTCAATGC
GTACGATTCATGCAGAAGAAACCCAAAAAAGAACACTGCA
TTTCCTTATTTTTCTTTATGTTTTTGTTTTGTTTTTCCTC
ATTTTTTCTTTCATTTTCTTCCGTCTTTCTCTTTGTCTCC
CTGAACAACTTGTTTTTGTCATCACAGGGTGCACCTCAAC
CCGAAAGCAAAAGAGGAGACTCGCAGAGAAAAGCTCTCTA
GAGAAGAGTCTGTGTTTGAATGGAGTATTGAAGGCGGAGA
ATAGAGTTCCCACAAGCCCCAGTGTTCAAAGCACAGCTCT
GAGAGAAAGCAGGGATCTCTGTACAAGACAAGCACGAGTG
TGCGTTTCAATCAGCGCCCCTTAATATATCACACATCTCT
CTCGTCCTCCGCAGGGGTTTGTGTTCCGTCTCTCTCCTCT
CTTTATTTCCTATCTATCACTTGGTTGATCAGTGCAGAGG
AGTCTGTGAGTCGTGCCATCAGTCATCGCTCTCTGTGTGG
CTCTGACTGACCCACTCCATCTTACTGCACCTGTGTGGCG
GCTGTTGGCACGGCGATGGCGTTTGATTGACGGCTGCCCT
AACTGTAACTACTCTGCCAGCCTGTCTCTGGCCTGGTGTG
GGCATAAGCGGGCAGCTGGATGAGAGAGACACACAAGCTG
TTAGGTGAACAGCGGCCAGACTCCTGCCATTAATATCTCC
GTGTTCTCCCTTTACGTCCACCCAAAATCCGTCCACTCAC
AGCACATATCAAACTCTATACTTTTTTTTTGGCCTACTTG
AGATTGTTTTGGAAGAAAAAGTTCCAGGTACTCTGATGCC
AGCAGCGCTAGCAAATTGATGACCGACGCTCGTCTCTGTC
TAGTTCATTGGTTTCAATGAGGCCGTCTCGTCTCTGTTTG
TATCTGTGTTTTGCCTCCATGTCAACGTCACTCTGCTGTT
GAGGTTGAGAGGAGCTGTTTCAGACTTTGCATGTCAATGT
TTTAGTTTGTATTTGCAAATACTGTATTTTATTTTTATCA
TTAAAACTGCCTCTAGTGTAATAATATTATTAACAATAAT
TATAAAAATAGGCAGCATTTCCTGAGTTTAGTAAGTTATG
TACAGTATAATTTATTATTTTCCTCCAGTTGGATTTTTTT
ATGATCGTATGGAAACTGCGCTTGATAAAGCATTATATTT
AGCTGGGTAGGTATTTAGATCTAATTATTATGTTTCGTTT
TGTTTTTGTTACTGTTTTTTTGTTTGTTTTTTGTTTTTTT
ATCCTGTTCTGACGCTGGTATATTTCTGAAAAGTGGTCAC
GGTGAACTGCTGATATGAAGGAAAAGAGACATTTCTCTTT
TTTCATTTTCTTTTTCTCCTCCGTGCATCGTTCATGAACT
CCAAACACATTTCTTAAAGCACTAGGACTCTGGACACTCG
GAGACAAACATAAGAAGAACCTGATATTTTTATTTGTAAT
GGTTTATGTATAATGTGAAGTTTCCTATCTGTTAATTCTC
TTTTTCTTTTGATAAAGAAAACAGCTATATTATACCCCAA
CTGCTATTGAACAGAAAGAGCGTTGATCTTGTTTACTGAT
ATTTGTCATCCTCTCTCTTACATTTCATTGGAACATCATT
GGCTTGGACAAATGCTTTTGTTTACCTGTTGTGTTGAATT
ATAGTACAAATCGAGGATCGTTCACCCCCCAAAAATGACA
AAACATGTATCACTTACTTTCTTCTGCAGAACGAACCAGT
TGAAGAGACGTTGAAGCTCTAAAAAGAAAGAAAAGCATCA
TTAAAATGTGCTGCATTCAACTGTGCTACATATAGTCCAA
TAAATCTATATGATTGCT

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations