Transcript

casc1-004

ID

ZDB-TSCRIPT-090929-13335

Name

casc1-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

dnai7 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000138673 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000138673.2|gene_biotype:protein_coding|ENSDARG00000016815.9 transcript_biotype:retained_intron gene_symbol:dnai7 cdna chromosome:GRCz11:4:17245205:17247024:1
TTTCTGTAACAGCCACCGAAAGATGGAAAGTCTGCAAAAA
AGAAAGGAGGAATCAGCAAAGCTGAAAAAGAGAGACTGCA
GAGAGAGGAAGAGGAAAAAAGACAAAGAGAAGCAGAAGAG
GCTCGTCTCATTGCTGAGCGTGAGGAGAATGAGCGACTTG
AGAGAGAGCGAATAGAACAAGAGAAGCAACATATACTTGA
GTTAAAGGACAGGGAGCGCAGAGAGGACGAGCTAAATGAA
CTGCGTCACATTTTAGATGAGAATCACTTTGCAGTCACTG
TGTGGGAAGCAGAATGCAGAGAAAAGTCAAAGTGGGAGCG
CTATATGCTTTGCGATGGCAGTCCAGACCCATCAGTGCAA
CCTGAAATCAACACTTACATCAGTTTGTGGAGAGATGACT
CAGAAAACCAAATCCAAAAGGTCTTGGAGGAATGTGCTCT
GACTCTTGAGTTGGAGAAGGAACTGGACTTTCTCTTGGGT
GATGGACCCGAGCCAAGCATTGCTGAGCAGTATCAAGAAA
CACTTCTGAGTCTACAAAATCTCATCCACTACAAACTTAA
CCAGGCCACTGAGGAGCTCCTGAAG

OTTDART00000031496 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000031496|OTTDARG00000008015|ZDB-GENE-041210-153 casc1|no_translation DKEY-172O10.5-004 LG_ BX547928.7 Danio rerio protein_coding NOVEL, 585 bp
TTTCTGTAACAGCCACCGAAAGATGGAAAGTCTGCAAAAA
AGAAAGGAGGAATCAGCAAAGCTGAAAAAGAGAGACTGCA
GAGAGAGGAAGAGGAAAAAAGACAAAGAGAAGCAGAAGAG
GCTCGTCTCATTGCTGAGCGTGAGGAGAATGAGCGACTTG
AGAGAGAGCGAATAGAACAAGAGAAGCAACATATACTTGA
GTTAAAGGACAGGGAGCGCAGAGAGGACGAGCTAAATGAA
CTGCGTCACATTTTAGATGAGAATCACTTTGCAGTCACTG
TGTGGGAAGCAGAATGCAGAGAAAAGTCAAAGTGGGAGCG
CTATATGCTTTGCGATGGCAGTCCAGACCCATCAGTGCAA
CCTGAAATCAACACTTACATCAGTTTGTGGAGAGATGACT
CAGAAAACCAAATCCAAAAGGTCTTGGAGGAATGTGCTCT
GACTCTTGAGTTGGAGAAGGAACTGGACTTTCTCTTGGGT
GATGGACCCGAGCCAAGCATTGCTGAGCAGTATCAAGAAA
CACTTCTGAGTCTACAAAATCTCATCCACTACAAACTTAA
CCAGGCCACTGAGGAGCTCCTGAAG

Related Transcripts

Transcripts related to dnai7

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	casc1-201 (1) Ensembl	Ensembl	2,172 nt	Select Tool
mRNA	casc1-202 (1) Ensembl	Ensembl	2,193 nt	Select Tool ZFIN BLAST
mRNA	casc1-206 (1) Ensembl	Ensembl	2,133 nt	Select Tool ZFIN BLAST
ncRNA	casc1-002 (1) Ensembl	Ensembl	734 nt	Select Tool
ncRNA	casc1-003 (1) Ensembl	Ensembl	464 nt	Select Tool
ncRNA	casc1-004	Ensembl	585 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations