Transcript

sort1b-201

ID
ZDB-TSCRIPT-090929-12965
Name
sort1b-201 Nomenclature History
Previous Names
  • sort1b-001
  • sort1l-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000134190 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000134190.2|gene_biotype:protein_coding|ENSDARG00000056252.7 transcript_biotype:protein_coding gene_symbol:sort1b cdna chromosome:GRCz11:8:25041713:25074319:-1
AGAACGTCAGCAACCGCTCAGGAGCGAGACACTGAGGAAT
TAATGCGCATTTAACCAGCAACACAGTCCTGTTGGAAATA
TTCCGAAGACGAAAAATGAGAGGCCTAGGACACTTTATTG
CACTTTTATTTTTTCCAATGGCATTTGGTGTGGATTTCCA
TGTGGATCCCGGATCCTCTAACGCGCACCCGCTGTATGCG
AAGTCTCCGGTATCCGTCAGAAGTCTGCTCGGGACGGGAT
CGGATGCAGATTTTTCTCGGGTTCACCATCGCATCCATAA
AAGAAGCACCGACCGTGGCTCAGACTCATGTAATGGGTTA
ACGTTAGAAGGATATGAGAGCAAGTTAACTAGCAATACGC
ACAACTGGACATTTCAAGATATTAGTGGATCTGTGTCTTT
GGCCTGGGTTGGGGATGGAACTGGGGTAGTCCTGGCTTTG
ACAACATTTCAGATGCCATTAGTCTTTCTGCGATTTGGAC
AGTCCAAACTGTACAGGAGTGAAAACTATGGCAAGTCATT
TGAGGATGTCTCAGAACTCATCAATAACACCTTCATCAAT
ACTGACTTTGGGATTGCTATTGGTCCGGAAAACTCTGGCA
AGGTGATTCTCACGGGAGATGCTTCGGGAGGCAGTGGTGC
CAGAATTTTCCGTTCAAGAGACTTTGGCAAGAGTTTCGTC
CACACAGAGCTGCCCTTTCACCCACTAATGCAGATAATGT
ACAACCCTCAAACTACTGATGTGCTTGCGGCTATCAGCAC
CAAGCATGACCTCTGGATCTCGAAAGACTTTGGCACAACA
TGGACAAAAATTCATGAGATGGTGTGCGTGGTGAAATGGG
GAATAGATGCTCTGTTCTTCTCAACCAACCTTAACGGATC
TTGTTTTGATAAAGGGATGCTGGTGCTGAGAAAGTCAGTT
GACCTTGGCGCTAATATAAAGACGGTTGCAGAGAGGATCT
ACTCCTTCGGGATTGGTGGACGTTTTCTGTTTGCTTCAGT
TATGGCAGCATCAGGAAACATAATACCGTCGGCATCAGAG
GAAATCATGCGTGCGATACATGTGTCAGTAGACCTTGGTG
AGACATGGAACATGGCACAACTTCCTCCTGTCAGTCACGA
GCAGTTTTACTCAATACTGGCAGCCAATGATGACATGGTC
TTTATGCATGTGGATGAACCAGGAGACACAGGCATTGGCA
CCATCTATGTGTCAGATGACAGAGGCACAGTCTATTCCAA
GTCTCTAGAACGCCATCTGTACACTGGAGGAGAGACAGAC
TTCACCAACGTCACTTCCCTCAGAGGAGTCTACACTACTA
GTGTGCTAGCTGAGGATAACTCTGTACAGACAGTAATAAC
GTTTGACCAGGGAGGAGAGTGGGTTCCTTTGAAGAAACCA
GAAAACACCAAGTGTGATTCCACAGCCAAAGATGCAGAAA
TGTGTAGTCTGCATATTCATGCTTCATACAGTACCTCCAT
GAAGGTCAACGTACCCATGCCACCTCTCAGTGAACCCAAT
GCTGTTGGACTTATCTTGGCTCATGGCAGCGTAGGGGACG
CCATCTCCATGCAGACGCCTGATGTGTATGTGTCTGATGA
TGGAGGCTACACCTGGCTGCAGGCTCTAAAGGGGCCACAT
CACTATGCCATCCTGGATTCTGGAGGCCTGCTGGTGGCCG
TGGAGCACAACCAGGCCAAACCCATCTCCGAGATTAAGTT
CTCCACCGATGAGGGCCAATGCTGGCATGTTCACACGTTC
ACCCAGACGCCGATGTACTTCACAGGCTTGGCCTCTGAGC
CTGGTGCCCGCTCAGTGAACGTCAGTCTCTGGGGTTATGA
AGACGCTATGATCAGCCACTGGGTCACCTACACTATTGAC
TTTAAAGACCTGCTAAAACGAAATTGCGAGAGTGATGATT
ATGTTCAATGGCTGGCACACTCTGATGACATCAGCGACCC
AGAAGACGGTTGCATGCTGGGCTACAAAGAGCGTTTCCTG
CGGGTGAGGAAGGACTCTGTTTGCTGGATTGGACGGGAAT
ATGTAGTTAACAAACAGCCCACGCCGTGTGTCTGCACACT
TGATGACTTCCTGTGTGACTTTGGATACTACCGTAAAGAA
AAGAGCTCTGAGTGTATAGAACAGGCTGAACTCAAAGGCC
ATGATCTGGAGATCTGCATTCATGGGAAGAAAGAGCAGCT
CCAGACCAGTGGATACCGAAAGATTCCAGGTGATAAGTGT
GAAGGAGGGAAACAACCAGAAAGAAAGGTGATCGACCTGA
GCAAGAGATGCGTCAGTGACCTGCTTGACCCCCAGCCGCT
GAATAATCCACAGTCAGAGCAATCCACCTCTCACACGGCT
CCTATCATTGCCATGGTCATCGCCATCCTGCTGACCGGTC
TAGTGTTTGGGGCACTGTTCGTAAAGAAATACGTCTGCGG
TGGAAGGTTCCTGGTCCACAGATACTCAGTCTTACAACAC
AATGTGGAAGCCAATGGTGTTGATGAACCGCTGGAGACAG
ATGTGGTTGGAGCACCGAAGAATGACTTCCATGATGATTC
AGATGAGGACCTGCTGGAGTAAAGCTGAGCAGAAGGAGCT
CCATTTGCTGTCATCCAGGCATTACTGCTGCTGTCTCTCT
TCTTAAAGCACAAGCCAGCTGTCAGTCAGCTTTTTCAAAC
CTTACCTACCAGCTAATGTTATGCACTTCCTGCTTCTCCA
TCAATCCGAGTGGACACGGTTGCTTCTCCACCAATAGGAG
GTGCTGTTCTCACAACTAAAGACTCTCTTGAATGTAGCTT
TGCTGAAGAAGCGTTTAAAATGCGGTTAATGGTGTTTTAA
TTCTATCTTCGGGCGTTTTAAGGACTGTTGATGGGATACT
TTGTAAAATACTTGTTTTTCTTTTCATGTACAGATTCCTT
TATGTCAAAACTGGACGTTTAGTTGATCAATTTTGAAATG
GATTAAGCATACGTTTGATTTAGCAACAGGAGGCATGATA
TCAATCATATCAAAGAGGTTTATTTAAAATACTGTGCTAC
TGAACCCATCAGTAAAATGTGATCTGCTTTCAAAGCTTTA
CTAACATTCACTGATATGAATATAGCAATAAACGGCAACA
GATTTGGCTTCAGAACAAACAAAATGGAGGAGTGTTCATC
GTTTAAGATTTCCGAACATTATTTACATCAGTGTTTCTCA
ATCACTTTCCTGGAGGATCACCAGCTCTGCACATTTTCCA
TGTCTCCTTAACCAAACACACCCGATTCAGATCATCAGCT
CATTAGCAGAGACTGAAAGACCTGAAATGGGTGTGACAAA
CAAAGGAGACATCCAAATCATGCAGTGTTGGTGGTCCTCC
AGGAACGTGGTTGGGAAACACTGCTTTACATGATACTGTG
TAGCTGTTTTTGATACAAAAATCTGTATCTAATATTATCG
ACATTATACACCTTGTGATAATTTGTAAATAAGTCACACT
TCAAGCCATTTCTGCGAGGGTTAGGTCAAATTTTGTAACG
ATAACTATTTTTATGAACTAAGCAATGACGCAGATGCATG
TAAAATAGGACTAGAGTTGTAGTTTGTGTACAACCTTGCA
CATTTTGCCCAAATCAAATTTTGTAGTTTTCTTGGCTCTC
GACGTTTGTGCTGTTTTTGTGGTTCTTGACTGCAGGAAAG
TCCCATGTCATTAAGCAGAAAAGGTGTGACTTTTTTTTTT
CTTTTTTAAACCGCCTGACACTTGACTAGGTGTTTGCGTG
ACAAACCATTAGTCGCAATAATTTAGCATGTGTTCATTAT
TTCCAAACATCAGTGAGAACAGACCCAGTGGTCGGAACTC
TTTGACCATGCCATTTAACAAGATTCAAATGCAATAGAAA
GCAGTTTAGCACCTTTCCGCTTGTACTTCCTGTTTAACGT
CTGATGCAGTGAGTTTTCTTTTAAGTATCTACACTTCATT
TCTAGCCAAATTTCTAGCAGTTGTTTACTTATCTATACCA
ATCCTAATGGAAAGTCTCATATTTTCATAGAGGAAGACAA
TCTCCTTTGCAAATACTCATATGATGTTTAAGAGGTATAA
AAATTCTAGTTTGTGTTTTGATTCAAGTGCCTAGCATGAA
GGCATAGCTTGTGCCTTTCAATAAAATGTAAATCTCATCA
TCTATAATTCTAAAACAAGAGGAAAGAAGTACCACAGTTC
AAAAACATGAGTTCATATTTCAGTACTTTTACTTTTTATA
AAACAGAATAATAGTAAATGAGCCTCTAATATTGTATTCC
TCCCATTTAATTGCAAATTGGACAGTTTAGGTTGTTCTCC
ATGCTTAATAAAAATAAAAATAATCTGGATATGACAAGTA
GACGCAATGCAAATGAAGTTAATTCTATTGTGACACTGAT
GTTATTTATGAGAGGTGGAACACTTCTTCAATGTACATAG
TAGTTGTGAAGCTCTGTACATATATAGCAATTCCCACTTT
GTATCTGTTATTTTCTTTGCTCTGTATATTTGGAAAAGAA
CTGTTAGTTTGAGAAATAAATTGATTTGTCCTGTTGA

OTTDART00000030868 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000030868|OTTDARG00000023650|ZDB-GENE-030131-7447 sort1b|OTTDARP00000025129 sort1l-001 LG_ BX470135.8 Danio rerio protein_coding KNOWN, 4557 bp
AGAACGTCAGCAACCGCTCAGGAGCGAGACACTGAGGAAT
TAATGCGCATTTAACCAGCAACACAGTCCTGTTGGAAATA
TTCCGAAGACGAAAAATGAGAGGCCTAGGACACTTTATTG
CACTTTTATTTTTTCCAATGGCATTTGGTGTGGATTTCCA
TGTGGATCCCGGATCCTCTAACGCGCACCCGCTGTATGCG
AAGTCTCCGGTATCCGTCAGAAGTCTGCTCGGGACGGGAT
CGGATGCAGATTTTTCTCGGGTTCACCATCGCATCCATAA
AAGAAGCACCGACCGTGGCTCAGACTCATGTAATGGGTTA
ACGTTAGAAGGATATGAGAGCAAGTTAACTAGCAATACGC
ACAACTGGACATTTCAAGATATTAGTGGATCTGTGTCTTT
GGCCTGGGTTGGGGATGGAACTGGGGTAGTCCTGGCTTTG
ACAACATTTCAGATGCCATTAGTCTTTCTGCGATTTGGAC
AGTCCAAACTGTACAGGAGTGAAAACTATGGCAAGTCATT
TGAGGATGTCTCAGAACTCATCAATAACACCTTCATCAAT
ACTGACTTTGGGATTGCTATTGGTCCGGAAAACTCTGGCA
AGGTGATTCTCACGGGAGATGCTTCGGGAGGCAGTGGTGC
CAGAATTTTCCGTTCAAGAGACTTTGGCAAGAGTTTCGTC
CACACAGAGCTGCCCTTTCACCCACTAATGCAGATAATGT
ACAACCCTCAAACTACTGATGTGCTTGCGGCTATCAGCAC
CAAGCATGACCTCTGGATCTCGAAAGACTTTGGCACAACA
TGGACAAAAATTCATGAGATGGTGTGCGTGGTGAAATGGG
GAATAGATGCTCTGTTCTTCTCAACCAACCTTAACGGATC
TTGTTTTGATAAAGGGATGCTGGTGCTGAGAAAGTCAGTT
GACCTTGGCGCTAATATAAAGACGGTTGCAGAGAGGATCT
ACTCCTTCGGGATTGGTGGACGTTTTCTGTTTGCTTCAGT
TATGGCAGCATCAGGAAACATAATACCGTCGGCATCAGAG
GAAATCATGCGTGCGATACATGTGTCAGTAGACCTTGGTG
AGACATGGAACATGGCACAACTTCCTCCTGTCAGTCACGA
GCAGTTTTACTCAATACTGGCAGCCAATGATGACATGGTC
TTTATGCATGTGGATGAACCAGGAGACACAGGCATTGGCA
CCATCTATGTGTCAGATGACAGAGGCACAGTCTATTCCAA
GTCTCTAGAACGCCATCTGTACACTGGAGGAGAGACAGAC
TTCACCAACGTCACTTCCCTCAGAGGAGTCTACACTACTA
GTGTGCTAGCTGAGGATAACTCTGTACAGACAGTAATAAC
GTTTGACCAGGGAGGAGAGTGGGTTCCTTTGAAGAAACCA
GAAAACACCAAGTGTGATTCCACAGCCAAAGATGCAGAAA
TGTGTAGTCTGCATATTCATGCTTCATACAGTACCTCCAT
GAAGGTCAACGTACCCATGCCACCTCTCAGTGAACCCAAT
GCTGTTGGACTTATCTTGGCTCATGGCAGCGTAGGGGACG
CCATCTCCATGCAGACGCCTGATGTGTATGTGTCTGATGA
TGGAGGCTACACCTGGCTGCAGGCTCTAAAGGGGCCACAT
CACTATGCCATCCTGGATTCTGGAGGCCTGCTGGTGGCCG
TGGAGCACAACCAGGCCAAACCCATCTCCGAGATTAAGTT
CTCCACCGATGAGGGCCAATGCTGGCATGTTCACACGTTC
ACCCAGACGCCGATGTACTTCACAGGCTTGGCCTCTGAGC
CTGGTGCCCGCTCAGTGAACGTCAGTCTCTGGGGTTATGA
AGACGCTATGATCAGCCACTGGGTCACCTACACTATTGAC
TTTAAAGACCTGCTAAAACGAAATTGCGAGAGTGATGATT
ATGTTCAATGGCTGGCACACTCTGATGACATCAGCGACCC
AGAAGACGGTTGCATGCTGGGCTACAAAGAGCGTTTCCTG
CGGGTGAGGAAGGACTCTGTTTGCTGGATTGGACGGGAAT
ATGTAGTTAACAAACAGCCCACGCCGTGTGTCTGCACACT
TGATGACTTCCTGTGTGACTTTGGATACTACCGTAAAGAA
AAGAGCTCTGAGTGTATAGAACAGGCTGAACTCAAAGGCC
ATGATCTGGAGATCTGCATTCATGGGAAGAAAGAGCAGCT
CCAGACCAGTGGATACCGAAAGATTCCAGGTGATAAGTGT
GAAGGAGGGAAACAACCAGAAAGAAAGGTGATCGACCTGA
GCAAGAGATGCGTCAGTGACCTGCTTGACCCCCAGCCGCT
GAATAATCCACAGTCAGAGCAATCCACCTCTCACACGGCT
CCTATCATTGCCATGGTCATCGCCATCCTGCTGACCGGTC
TAGTGTTTGGGGCACTGTTCGTAAAGAAATACGTCTGCGG
TGGAAGGTTCCTGGTCCACAGATACTCAGTCTTACAACAC
AATGTGGAAGCCAATGGTGTTGATGAACCGCTGGAGACAG
ATGTGGTTGGAGCACCGAAGAATGACTTCCATGATGATTC
AGATGAGGACCTGCTGGAGTAAAGCTGAGCAGAAGGAGCT
CCATTTGCTGTCATCCAGGCATTACTGCTGCTGTCTCTCT
TCTTAAAGCACAAGCCAGCTGTCAGTCAGCTTTTTCAAAC
CTTACCTACCAGCTAATGTTATGCACTTCCTGCTTCTCCA
TCAATCCGAGTGGACACGGTTGCTTCTCCACCAATAGGAG
GTGCTGTTCTCACAACTAAAGACTCTCTTGAATGTAGCTT
TGCTGAAGAAGCGTTTAAAATGCGGTTAATGGTGTTTTAA
TTCTATCTTCGGGCGTTTTAAGGACTGTTGATGGGATACT
TTGTAAAATACTTGTTTTTCTTTTCATGTACAGATTCCTT
TATGTCAAAACTGGACGTTTAGTTGATCAATTTTGAAATG
GATTAAGCATACGTTTGATTTAGCAACAGGAGGCATGATA
TCAATCATATCAAAGAGGTTTATTTAAAATACTGTGCTAC
TGAACCCATCAGTAAAATGTGATCTGCTTTCAAAGCTTTA
CTAACATTCACTGATATGAATATAGCAATAAACGGCAACA
GATTTGGCTTCAGAACAAACAAAATGGAGGAGTGTTCATC
GTTTAAGATTTCCGAACATTATTTACATCAGTGTTTCTCA
ATCACTTTCCTGGAGGATCACCAGCTCTGCACATTTTCCA
TGTCTCCTTAACCAAACACACCCGATTCAGATCATCAGCT
CATTAGCAGAGACTGAAAGACCTGAAATGGGTGTGACAAA
CAAAGGAGACATCCAAATCATGCAGTGTTGGTGGTCCTCC
AGGAACGTGGTTGGGAAACACTGCTTTACATGATACTGTG
TAGCTGTTTTTGATACAAAAATCTGTATCTAATATTATCG
ACATTATACACCTTGTGATAATTTGTAAATAAGTCACACT
TCAAGCCATTTCTGCGAGGGTTAGGTCAAATTTTGTAACG
ATAACTATTTTTATGAACTAAGCAATGACGCAGATGCATG
TAAAATAGGACTAGAGTTGTAGTTTGTGTACAACCTTGCA
CATTTTGCCCAAATCAAATTTTGTAGTTTTCTTGGCTCTC
GACGTTTGTGCTGTTTTTGTGGTTCTTGACTGCAGGAAAG
TCCCATGTCATTAAGCAGAAAAGGTGTGACTTTTTTTTTT
CTTTTTTAAACCGCCTGACACTTGACTAGGTGTTTGCGTG
ACAAACCATTAGTCGCAATAATTTAGCATGTGTTCATTAT
TTCCAAACATCAGTGAGAACAGACCCAGTGGTCGGAACTC
TTTGACCATGCCATTTAACAAGATTCAAATGCAATAGAAA
GCAGTTTAGCACCTTTCCGCTTGTACTTCCTGTTTAACGT
CTGATGCAGTGAGTTTTCTTTTAAGTATCTACACTTCATT
TCTAGCCAAATTTCTAGCAGTTGTTTACTTATCTATACCA
ATCCTAATGGAAAGTCTCATATTTTCATAGAGGAAGACAA
TCTCCTTTGCAAATACTCATATGATGTTTAAGAGGTATAA
AAATTCTAGTTTGTGTTTTGATTCAAGTGCCTAGCATGAA
GGCATAGCTTGTGCCTTTCAATAAAATGTAAATCTCATCA
TCTATAATTCTAAAACAAGAGGAAAGAAGTACCACAGTTC
AAAAACATGAGTTCATATTTCAGTACTTTTACTTTTTATA
AAACAGAATAATAGTAAATGAGCCTCTAATATTGTATTCC
TCCCATTTAATTGCAAATTGGACAGTTTAGGTTGTTCTCC
ATGCTTAATAAAAATAAAAATAATCTGGATATGACAAGTA
GACGCAATGCAAATGAAGTTAATTCTATTGTGACACTGAT
GTTATTTATGAGAGGTGGAACACTTCTTCAATGTACATAG
TAGTTGTGAAGCTCTGTACATATATAGCAATTCCCACTTT
GTATCTGTTATTTTCTTTGCTCTGTATATTTGGAAAAGAA
CTGTTAGTTTGAGAAATAAATTGATTTGTCCTGTTGA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations