PUBLICATION

Novel ethanol-sensitive mutants identified in an F3 forward genetic screen

Authors
Swartz, M.E., Lovely, C.B., McCarthy, N., Kuka, T., Eberhart, J.K.
ID
ZDB-PUB-191120-10
Date
2019
Source
Alcoholism, clinical and experimental research   44(1): 56-65 (Journal)
Registered Authors
Eberhart, Johann, Lovely, Ben, McCarthy, Neil, Swartz, Mary
Keywords
none
MeSH Terms
  • Animals
  • Craniofacial Abnormalities/chemically induced
  • Craniofacial Abnormalities/genetics
  • Disease Models, Animal*
  • Ethanol/toxicity*
  • Female
  • Fetal Alcohol Spectrum Disorders/genetics*
  • Fetal Alcohol Spectrum Disorders/pathology
  • Genetic Predisposition to Disease/genetics
  • Genetic Testing/methods*
  • Mutation/drug effects*
  • Mutation/genetics*
  • Pregnancy
  • Zebrafish
(all 14)
PubMed
31742718 Full text @ Alcoholism Clin. Exp. Res.
Abstract
Fetal Alcohol Spectrum Disorders (FASD), collectively refers to all deleterious outcomes due to prenatal alcohol exposures. Alterations to the face are common phenotypes in FASD. While alcohol exposure is the underlying cause of FASD, many variables modify the outcomes of such exposures. Genetic risk is one such variable, yet we still have a limited understanding of the nature of the genetic loci mediating susceptibility to FASD.
We employed ENU-based random mutagenesis in zebrafish to identify mutations that enhanced the teratogenicity of ethanol. F3 embryos obtained from 126 inbred F2 families were exposed to 1% ethanol in the medium (approximately 41 mM tissue levels). Zebrafish stained with Alcian Blue and Alizarin Red were screened for qualitative alterations to the craniofacial skeleton between 4 to 7 days post fertilization (dpf).
In all, we recovered six ethanol-sensitive mutants, five from the genetic screen itself and one as a background mutation in one of our wild-type lines. Each mutant has a unique ethanol-induced phenotype relative to the other mutant lines. All but one mutation appears to be recessive in nature and only one mutant, au29, has apparent craniofacial defects in the absence of ethanol. To validate the genetic screen, we genetically mapped au29 and found that it carries a mutation in a previously uncharacterized gene, si:dkey-88l16.3.
The phenotypes of these ethanol-sensitive mutants differ from those in previous characterizations of gene-ethanol interactions. Thus, each mutant is likely to provide novel insights into ethanol teratogenesis. Given that most of these mutants only have craniofacial defects in the presence of ethanol and our mapping of au29, it is also likely that many of the mutants will be previously uncharacterized. Collectively, our findings point to the importance of unbiased genetic screens in the identification, and eventual characterization, of risk alleles for FASD.
Genes / Markers
Marker Marker Type Name
si:dkey-88l16.3GENEsi:dkey-88l16.3
unm_au15GENEun-named au15
unm_au26GENEun-named au26
unm_au27GENEun-named au27
unm_au28GENEun-named au28
unm_au32GENEun-named au32
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Figures
Figure Gallery (9 images)
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Expression
Phenotype
Mutations / Transgenics
Allele Construct Type Affected Genomic Region
au15
    Unknown
    au26
      Unknown
      au27
        Unknown
        au28
          Unknown
          au29
            Point Mutation
            au32
              Unknown
              au113
                Small Deletion
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                Human Disease / Model
                Human Disease Fish Conditions Evidence
                fetal alcohol spectrum disorderTAS
                1 - 1 of 1
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                Sequence Targeting Reagents
                Target Reagent Reagent Type
                si:dkey-88l16.3CRISPR1-si:dkey-88l16.3CRISPR
                1 - 1 of 1
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                Fish
                Antibodies
                No data available
                Orthology
                Engineered Foreign Genes
                No data available
                Mapping