PUBLICATION

The maternal to zygotic transition regulates genome-wide heterochromatin establishment in the zebrafish embryo

Authors
Laue, K., Rajshekar, S., Courtney, A.J., Lewis, Z.A., Goll, M.G.
ID
ZDB-PUB-190406-11
Date
2019
Source
Nature communications   10: 1551 (Journal)
Registered Authors
Goll, Mary, Laue, Kathrin, Rajshekar, Shrivarsha
Keywords
none
Datasets
GEO:GSE113086
MeSH Terms
  • Animals
  • Chromatin/genetics
  • Chromatin/metabolism
  • Chromatin/ultrastructure
  • Embryo, Nonmammalian/cytology
  • Embryonic Development/genetics*
  • Gene Expression Regulation, Developmental
  • Heterochromatin/genetics*
  • Heterochromatin/metabolism
  • Heterochromatin/ultrastructure
  • MicroRNAs/metabolism
  • MicroRNAs/physiology
  • Transcription, Genetic
  • Zebrafish/embryology*
  • Zebrafish Proteins/genetics
  • Zebrafish Proteins/metabolism
  • Zebrafish Proteins/physiology
(all 17)
PubMed
30948728 Full text @ Nat. Commun.
Abstract
The segregation of eukaryotic genomes into euchromatin and heterochromatin represents a fundamental and poorly understood process. Here, we demonstrate that genome-wide establishment of heterochromatin is triggered by the maternal to zygotic transition (MZT) during zebrafish embryogenesis. We find that prior to MZT, zebrafish lack hallmarks of heterochromatin including histone H3 lysine 9 trimethylation (H3K9me3) and condensed chromatin ultrastructure. Global establishment of heterochromatic features occurs following MZT and requires both activation of the zygotic genome and degradation of maternally deposited RNA. Mechanistically, we demonstrate that zygotic transcription of the micro RNA miR-430 promotes degradation of maternal RNA encoding the chromatin remodeling protein Smarca2, and that clearance of Smarca2 is required for global heterochromatin establishment in the early embryo. Our results identify MZT as a key developmental regulator of heterochromatin establishment during vertebrate embryogenesis and uncover functions for Smarca2 in protecting the embryonic genome against heterochromatinization.
Genes / Markers
Marker Marker Type Name
aldh7a1GENEaldehyde dehydrogenase 7 family, member A1
dicer1GENEdicer 1, ribonuclease type III
dre-mir-430a-10MIRNAGmicroRNA 430a-10
dre-mir-430a-11MIRNAGmicroRNA 430a-11
dre-mir-430a-12MIRNAGmicroRNA 430a-12
dre-mir-430a-13MIRNAGmicroRNA 430a-13
dre-mir-430a-14MIRNAGmicroRNA 430a-14
dre-mir-430a-15MIRNAGmicroRNA 430a-15
dre-mir-430a-16MIRNAGmicroRNA 430a-16
dre-mir-430a-17MIRNAGmicroRNA 430a-17
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Figures
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Expression
Phenotype
Mutations / Transgenics
No data available
Human Disease / Model
No data available
Sequence Targeting Reagents
Fish
Antibodies
Name Type Antigen Genes Isotypes Host Organism
Ab2-tubamonoclonal
    IgG1Mouse
    Ab15-h3polyclonal
      IgGRabbit
      Ab24-h3polyclonal
        IgGRabbit
        1 - 3 of 3
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        Orthology
        No data available
        Engineered Foreign Genes
        No data available
        Mapping
        No data available