PUBLICATION

Genetic Dissection of Dual Roles for the Transcription Factor six7 in Photoreceptor Development and Patterning in Zebrafish

Authors
Sotolongo-Lopez, M., Alvarez-Delfin, K., Saade, C.J., Vera, D.L., Fadool, J.M.
ID
ZDB-PUB-160409-2
Date
2016
Source
PLoS Genetics   12: e1005968 (Journal)
Registered Authors
Fadool, James M.
Keywords
Retina, Embryos, Photoreceptors, Larvae, Zebrafish, Mitosis, Cell differentiation, Alleles
MeSH Terms
  • Alleles
  • Animals
  • Body Patterning*
  • Homeodomain Proteins/genetics
  • Homeodomain Proteins/physiology*
  • Photoreceptor Cells, Vertebrate/metabolism*
  • Zebrafish/embryology*
  • Zebrafish Proteins/genetics
  • Zebrafish Proteins/physiology*
(all 9)
PubMed
27058886 Full text @ PLoS Genet.
Abstract

The visual system of a particular species is highly adapted to convey detailed ecological and behavioral information essential for survival. The consequences of structural mutations of opsins upon spectral sensitivity and environmental adaptation have been studied in great detail, but lacking is knowledge of the potential influence of alterations in gene regulatory networks upon the diversity of cone subtypes and the variation in the ratio of rods and cones observed in numerous diurnal and nocturnal species. Exploiting photoreceptor patterning in cone-dominated zebrafish, we uncovered two independent mechanisms by which the sine oculis homeobox homolog 7 (six7) regulates photoreceptor development. In a genetic screen, we isolated the lots-of-rods-junior (ljrp23ahub) mutation that resulted in an increased number and uniform distribution of rods in otherwise normal appearing larvae. Sequence analysis, genome editing using TALENs and knockdown strategies confirm ljrp23ahub as a hypomorphic allele of six7, a teleost orthologue of six3, with known roles in forebrain patterning and expression of opsins. Based on the lack of predicted protein-coding changes and a deletion of a conserved element upstream of the transcription start site, a cis-regulatory mutation is proposed as the basis of the reduced expression of six7 in ljrp23ahub. Comparison of the phenotypes of the hypomorphic and knock-out alleles provides evidence of two independent roles in photoreceptor development. EdU and PH3 labeling show that the increase in rod number is associated with extended mitosis of photoreceptor progenitors, and TUNEL suggests that the lack of green-sensitive cones is the result of cell death of the cone precursor. These data add six7 to the small but growing list of essential genes for specification and patterning of photoreceptors in non-mammalian vertebrates, and highlight alterations in transcriptional regulation as a potential source of photoreceptor variation across species.

Genes / Markers
Marker Marker Type Name
crxGENEcone-rod homeobox
ljrRRreg_region_ljr
neurod1GENEneuronal differentiation 1
opn1mw1GENEopsin 1 (cone pigments), medium-wave-sensitive, 1
pax6aGENEpaired box 6a
rx1GENEretinal homeobox gene 1
six3aGENESIX homeobox 3a
six3bGENESIX homeobox 3b
six7GENESIX homeobox 7
tbx2bGENET-box transcription factor 2b
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Figures
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Expression
Phenotype
Mutations / Transgenics
Allele Construct Type Affected Genomic Region
fl4
    Small Deletion
    p23ahub
      Deficiency
      p25bbtl
        Unknown
        vu87
          Point Mutation
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          Human Disease / Model
          No data available
          Sequence Targeting Reagents
          Target Reagent Reagent Type
          six7MO1-six7MRPHLNO
          six7MO3-six7MRPHLNO
          six7TALEN2-six7TALEN
          1 - 3 of 3
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          Fish
          Antibodies
          Orthology
          No data available
          Engineered Foreign Genes
          No data available
          Mapping