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FIG 4
Phylogeny and predicted conserved domains of class I–III gag genes without retrotrans_gag domain. The left panel shows the phylogenetic tree constructed with gag sequences without predictable retrotrans_gag domain. Eight viruses or ERVs were used as references according to the BLAST results of class I–III gag genes without retrotrans_gag domain. The right panel shows the composition of the five predicted conserved domains in each elements. The length ratio between the lines refers to the actual sequence length ratio, and the positions of domains refer to their relative position in the unaligned sequences.
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