Gene

etv5b

ID
ZDB-GENE-991228-4
Name
ETS variant transcription factor 5b
Symbol
etv5b Nomenclature History
Previous Names
  • cb805 (1)
  • erm1 (1)
  • erm
  • wu:fe05h04
  • wu:fj66a04
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Exhibits sequence-specific DNA binding activity. Involved in several processes, including limb morphogenesis; nervous system development; and pronephros development. Predicted to localize to nucleus. Is expressed in several structures, including brain; eye; mesoderm; neural plate; and pharyngeal arch. Orthologous to human ETV5 (ETS variant transcription factor 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
90 figures from 66 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With etv5b Human Ortholog
No data available
Associated With etv5b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000418 Ets domain
Domain IPR006715 PEA3-type ETS-domain transcription factor, N-terminal
Family IPR046328 ETS family
Homologous_superfamily IPR036388 Winged helix-like DNA-binding domain superfamily
Homologous_superfamily IPR036390 Winged helix DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Ets domain ETS family PEA3-type ETS-domain transcription factor, N-terminal Winged helix DNA-binding domain superfamily Winged helix-like DNA-binding domain superfamily
UniProtKB:A0A8M2BDC7 522
UniProtKB:F1QK52 524
UniProtKB:A0A8M2BD54 524
UniProtKB:A0A2R8QC01 526
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA etv5b-201 (1) Ensembl 2,837 nt
mRNA etv5b-202 (1) Ensembl 2,867 nt
mRNA etv5b-203 (1) Ensembl 3,856 nt
mRNA etv5b-204 (1) Ensembl 3,996 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations