Gene

ebf2

ID
ZDB-GENE-990715-11
Name
EBF transcription factor 2
Symbol
ebf2 Nomenclature History
Previous Names
  • EBF2 (1)
  • coe2
  • Zcoe2
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in several structures, including anterior neural plate; brain; hindbrain neural rod; midbrain neural keel; and posterior neural keel. Orthologous to human EBF2 (EBF transcription factor 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ebf2 Human Ortholog
No data available
Associated With ebf2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018350 Transcription factor COE, conserved site
Domain IPR002909 IPT domain
Domain IPR032200 Transcription factor COE, DNA-binding domain
Domain IPR032201 Transcription factor COE, helix-loop-helix domain
Domain IPR038006 Transcription factor COE, IPT domain
Family IPR003523 Transcription factor COE
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR014756 Immunoglobulin E-set
Homologous_superfamily IPR038173 Transcription factor COE, DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Immunoglobulin E-set Immunoglobulin-like fold IPT domain Transcription factor COE Transcription factor COE, conserved site Transcription factor COE, DNA-binding domain Transcription factor COE, DNA-binding domain superfamily Transcription factor COE, helix-loop-helix domain Transcription factor COE, IPT domain
UniProtKB:O93375 579
UniProtKB:A2BIQ0 578
UniProtKB:A0A8M2BCW5 580
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ebf2-201 (1) Ensembl 2,904 nt
mRNA ebf2-202 (1) Ensembl 4,994 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations