Gene
hoxd3a
- ID
- ZDB-GENE-990415-120
- Name
- homeobox D3a
- Symbol
- hoxd3a Nomenclature History
- Previous Names
-
- hoxd3
- im:7144208 (1)
- Z-56
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification; embryonic skeletal system morphogenesis; and positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in several structures, including hindbrain; hindbrain neural keel; neural tube; pectoral fin bud; and spinal cord. Orthologous to human HOXD3 (homeobox D3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 14 figures from 8 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7144208 (6 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR001827 | Homeobox protein, antennapedia type, conserved site |
Conserved_site | IPR017970 | Homeobox, conserved site |
Domain | IPR001356 | Homeodomain |
Domain | IPR020479 | Homeodomain, metazoa |
Domain | IPR025281 | Domain of unknown function DUF4074 |
Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
Domain Details Per Protein
Protein | Length | Domain of unknown function DUF4074 | Homedomain-like superfamily | Homeobox, conserved site | Homeobox protein, antennapedia type, conserved site | Homeodomain | Homeodomain, metazoa |
---|---|---|---|---|---|---|---|
UniProtKB:O42370
|
396 | ||||||
UniProtKB:A0A8M9PRW4
|
396 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
hoxd3a-201
(1)
|
Ensembl | 2567 nt | |
mRNA |
hoxd3a-203
(1)
|
Havana | 1970 nt | |
mRNA |
hoxd3a-204
(1)
|
Ensembl | 1919 nt | |
ncRNA |
hoxd3a-002
(1)
|
Havana | 480 nt |
Interactions and Pathways
No data available
Plasmids