Gene

slf1

ID
ZDB-GENE-141216-402
Name
SMC5-SMC6 complex localization factor 1
Symbol
slf1 Nomenclature History
Previous Names
  • si:ch73-280o22.1
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to be involved in positive regulation of double-strand break repair. Orthologous to human SLF1 (SMC5-SMC6 complex localization factor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Ha et al., 2023
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With slf1 Human Ortholog
No data available
Associated With slf1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001357 BRCT domain
Family IPR042479 SMC5-SMC6 complex localization factor protein 1
Homologous_superfamily IPR036420 BRCT domain superfamily
Homologous_superfamily IPR036770 Ankyrin repeat-containing domain superfamily
Repeat IPR002110 Ankyrin repeat
Domain Details Per Protein
Protein Length Ankyrin repeat Ankyrin repeat-containing domain superfamily BRCT domain BRCT domain superfamily SMC5-SMC6 complex localization factor protein 1
UniProtKB:A0A0R4INB3 897
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA slf1-201 (1) Ensembl 2,417 nt
mRNA slf1-202 (1) Ensembl 3,516 nt
mRNA slf1-203 (1) Ensembl 3,593 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations