Gene

ankfn1a

ID

ZDB-GENE-130603-21

Name

ankyrin repeat and fibronectin type III domain containing 1a

Symbol

ankfn1a Nomenclature History

Previous Names

ankfn1
si:ch211-277e21.1
si:ch211-277e21.2

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Orthologous to human ANKFN1 (ankyrin repeat and fibronectin type III domain containing 1).

Genome Resources

Note

The gene model in Ensembl is split into two Ensembl genes: ENSDARG00000096800 and ENSDARG00000060941.

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Wang et al., 2022
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ankfn1a Human Ortholog

No data available

Associated With ankfn1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003961	Fibronectin type III
Family	IPR039269	Ankyrin repeat and fibronectin type-III domain-containing protein 1
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin repeat and fibronectin type-III domain-containing protein 1	Ankyrin repeat-containing domain superfamily	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin-like fold
UniProtKB:A0A8M3AYI6 InterPro	1312
UniProtKB:A0A8M9PMH9 InterPro	1412
UniProtKB:A0A9V2V100 InterPro	1418

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ankfn1-201 (1) Ensembl	Ensembl	3,178 nt	Select Tool
mRNA	ankfn1-203 (1) Ensembl	Ensembl	3,162 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-277e21.1-201 (1) Ensembl	Ensembl	609 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations