Gene

slc25a38b

ID
ZDB-GENE-110214-1
Name
solute carrier family 25 member 38b
Symbol
slc25a38b Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to have glycine transmembrane transporter activity. Involved in erythrocyte differentiation and hemoglobin biosynthetic process. Predicted to localize to mitochondrion. Human ortholog(s) of this gene implicated in autosomal recessive pyridoxine-refractory sideroblastic anemia 2. Is expressed in blood; blood island; and posterior cardinal vein. Orthologous to human SLC25A38 (solute carrier family 25 member 38).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Fernández-Murray et al., 2016
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With slc25a38b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
autosomal recessive pyridoxine-refractory sideroblastic anemia 2 Alliance Anemia, sideroblastic, 2, pyridoxine-refractory 205950
Associated With slc25a38b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR002067 Mitochondrial carrier protein
Family IPR030847 Mitochondrial glycine transporter Hem25/SLC25A38
Homologous_superfamily IPR023395 Mitochondrial carrier domain superfamily
Repeat IPR018108 Mitochondrial substrate/solute carrier
Domain Details Per Protein
Protein Length Mitochondrial carrier domain superfamily Mitochondrial carrier protein Mitochondrial glycine transporter Hem25/SLC25A38 Mitochondrial substrate/solute carrier
UniProtKB:P0CAT2 287
UniProtKB:A0A8M9Q680 299
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA slc25a38b-201 (1) Ensembl 789 nt
mRNA slc25a38b-202 (1) Ensembl 3,947 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations