Gene

vps72b

ID

ZDB-GENE-100922-13

Name

vacuolar protein sorting 72 homolog b

Symbol

vps72b Nomenclature History

Previous Names

si:ch211-203d17.1 (1)

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Predicted to be involved in histone exchange. Predicted to localize to nucleus. Orthologous to human VPS72 (vacuolar protein sorting 72 homolog).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Diotel et al., 2015

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With vps72b Human Ortholog

No data available

Associated With vps72b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR013272	Vps72/YL1, C-terminal
Domain	IPR046757	Vps72/YL1, N-terminal

Domain Details Per Protein

Protein	Length	Vps72/YL1, C-terminal	Vps72/YL1, N-terminal
UniProtKB:A0A8M3AJ70 InterPro	374

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	vps72b-201 (1) Ensembl	Ensembl	1,008 nt	Select Tool ZFIN BLAST
mRNA	vps72b-202 (1) Ensembl	Ensembl	1,059 nt	Select Tool ZFIN BLAST
mRNA	vps72b-203 (1) Ensembl	Ensembl	672 nt	Select Tool ZFIN BLAST
mRNA	vps72b-204 (1) Ensembl	Ensembl	1,101 nt	Select Tool ZFIN BLAST
mRNA	vps72b-205 (1) Ensembl	Ensembl	1,080 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations