Gene
lingo4b
- ID
- ZDB-GENE-091214-3
- Name
- leucine rich repeat and Ig domain containing 4b
- Symbol
- lingo4b Nomenclature History
- Previous Names
-
- zgc:198379
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to localize to extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in glaucoma. Is expressed in Purkinje cell; cerebellum; granule cell; hindbrain; and optic tectum. Orthologous to several human genes including LINGO1 (leucine rich repeat and Ig domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- 2 figures from Takeuchi et al., 2017
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000372 | Leucine-rich repeat N-terminal domain |
Domain | IPR003598 | Immunoglobulin subtype 2 |
Domain | IPR003599 | Immunoglobulin domain subtype |
Domain | IPR007110 | Immunoglobulin-like domain |
Domain | IPR013098 | Immunoglobulin I-set |
Family | IPR050467 | Leucine-rich repeat and fibronectin type-III domain-containing |
Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Repeat | IPR001611 | Leucine-rich repeat |
Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Repeat | IPR026906 | BspA-type LRR region |
Domain Details Per Protein
Protein | Length | BspA-type LRR region | Immunoglobulin domain subtype | Immunoglobulin I-set | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 | Leucine-rich repeat | Leucine-rich repeat and fibronectin type-III domain-containing | Leucine-rich repeat domain superfamily | Leucine-rich repeat N-terminal domain | Leucine-rich repeat, typical subtype |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A3KH16
|
604 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
lingo4b-201
(1)
|
Ensembl | 1,889 nt | ||
mRNA |
lingo4b-202
(1)
|
Ensembl | 3,031 nt |
Interactions and Pathways
No data available
Plasmids
No data available