Gene
atg9b
- ID
- ZDB-GENE-091111-3
- Name
- autophagy related 9B
- Symbol
- atg9b Nomenclature History
- Previous Names
-
- zgc:158872
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Description
- Predicted to be involved in autophagy of mitochondrion; late nucleophagy; and protein localization to phagophore assembly site. Predicted to act upstream of or within autophagy and protein transport. Predicted to be located in Golgi apparatus; autophagosome membrane; and cytoplasmic vesicle membrane. Predicted to be active in autophagosome and phagophore assembly site. Orthologous to human ATG9B (autophagy related 9B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR007241 | Autophagy-related protein 9 |
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Domain Details Per Protein
| Protein | Length | Autophagy-related protein 9 |
|---|---|---|
|
UniProtKB:A0A2R8QI63
|
805 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEYP-87A6 | ZFIN Curated Data | |
| Encodes | cDNA | MGC:158872 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001320078 (1) | 7038 nt | ||
| Genomic | GenBank:CU019563 (2) | 194521 nt | ||
| Polypeptide | UniProtKB:A0A2R8QI63 (1) | 805 aa |
- Cao, L., Fang, H., Yan, D., Wu, X.M., Zhang, J., Chang, M.X. (2022) CD44a functions as a regulator of p53 signaling, apoptosis and autophagy in the antibacterial immune response. Communications biology. 5:889
- Liu, R., Long, Y., Liu, R., Song, G., Li, Q., Yan, H., Cui, Z. (2022) Understanding the Function and Mechanism of Zebrafish Tmem39b in Regulating Cold Resistance. International Journal of Molecular Sciences. 23(19):
- Kim, M., Lu, L., Dvornikov, A.V., Ma, X., Ding, Y., Zhu, P., Olson, T.M., Lin, X., Xu, X. (2021) TFEB Overexpression, Not mTOR Inhibition, Ameliorates RagCS75Y Cardiomyopathy. International Journal of Molecular Sciences. 22(11):
- Sun, C.C., Zhou, Z.Q., Chen, Z.L., Zhu, R.K., Yang, D., Peng, X.Y., Zheng, L., Tang, C.F. (2021) Identification of Potentially Related Genes and Mechanisms Involved in Skeletal Muscle Atrophy Induced by Excessive Exercise in Zebrafish. Biology. 10(8):
- Han, B., Luo, J., Jiang, P., Li, Y., Wang, Q., Bai, Y., Chen, J., Wang, J., Zhang, J. (2020) Inhibition of Embryonic HSP 90 Function Promotes Variation of Cold Tolerance in Zebrafish. Frontiers in genetics. 11:541944
- Zhou, Z., Zheng, L., Tang, C., Chen, Z., Zhu, R., Peng, X., Wu, X., Zhu, P. (2020) Identification of Potentially Relevant Genes for Excessive Exercise-Induced Pathological Cardiac Hypertrophy in Zebrafish. Frontiers in Physiology. 11:565307
- Liu, J., Liao, G., Tu, H., Huang, Y., Peng, T., Xu, Y., Chen, X., Huang, Z., Zhang, Y., Meng, X., Zou, F. (2019) A protective role of autophagy in Pb-induced developmental neurotoxicity in zebrafish. Chemosphere. 235:1050-1058
- Meireles, A.M., Shen, K., Zoupi, L., Iyer, H., Bouchard, E.L., Williams, A., Talbot, W.S. (2018) The Lysosomal Transcription Factor TFEB Represses Myelination Downstream of the Rag-Ragulator Complex. Developmental Cell. 47:319-330.e5
- Saera-Vila, A., Kish, P.E., Louie, K.W., Grzegorski, S.J., Klionsky, D.J., Kahana, A. (2016) Autophagy Regulates Cytoplasmic Remodeling During Cell Reprogramming in a Zebrafish Model of Muscle Regeneration. Autophagy. 12(10):1864-1875
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
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