Gene
slco5a1a
- ID
- ZDB-GENE-090316-1
- Name
- solute carrier organic anion transporter family member 5A1a
- Symbol
- slco5a1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Ambiguous Mapping Details/Browsers
- Description
- Predicted to enable sodium-independent organic anion transmembrane transporter activity. Predicted to be involved in sodium-independent organic anion transport. Predicted to act upstream of or within monoatomic ion transport and transmembrane transport. Predicted to be located in membrane and secretory granule. Predicted to be active in plasma membrane. Is expressed in brain; gill; liver; pleuroperitoneal region; and skeletal muscle. Orthologous to human SLCO5A1 (solute carrier organic anion transporter family member 5A1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Popovic et al., 2010
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
No data available
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slco5a1a-201
(1)
|
Ensembl | 968 nt | ||
| mRNA |
slco5a1a-202
(1)
|
Ensembl | 4,185 nt | ||
| mRNA |
slco5a1a-203
(1)
|
Ensembl | 1,357 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-245B7 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-246L3 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001353347 (1) | 1386 nt | ||
| Genomic | GenBank:BX005044 (1) | 174623 nt | ||
| Polypeptide | RefSeq:NP_001340276 (1) |
- Kawaguchi, M., Sugiyama, K., Matsubara, K., Lin, C.Y., Kuraku, S., Hashimoto, S., Suwa, Y., Yong, L.W., Takino, K., Higashida, S., Kawamura, D., Yu, J.K., Seki, Y. (2019) Co-option of the PRDM14-CBFA2T complex from motor neurons to pluripotent cells during vertebrate evolution. Development (Cambridge, England). 146(2):
- Lu, X., Tian, J., Wen, H., Jiang, M., Liu, W., Wu, F., Yu, L., Zhong, S. (2019) Microcystin-LR-regulated transcriptome dynamics in ZFL cells. Aquatic toxicology (Amsterdam, Netherlands). 212:222-232
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Muzzio, A.M., Noyes, P.D., Stapleton, H.M., Lema, S.C. (2014) Tissue distribution and thyroid hormone effects on mRNA abundance for membrane transporters Mct8, Mct10, and organic anion-transporting polypeptides (Oatps) in a teleost fish. Comparative biochemistry and physiology. Part A, Molecular & integrative physiology. 167:77-89
- Popovic, M., Zaja, R., and Smital, T. (2010) Organic anion transporting polypeptides (OATP) in zebrafish (Danio rerio): Phylogenetic analysis and tissue distribution. Comparative biochemistry and physiology. Part A, Molecular & integrative physiology. 155(3):327-335
- García-Lecea, M., Kondrychyn, I., Fong, S.H., Ye, Z.R., and Korzh, V. (2008) In vivo Analysis of Choroid Plexus Morphogenesis in Zebrafish. PLoS One. 3(9):e3090
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