Gene

klf5a

ID

ZDB-GENE-090312-167

Name

Kruppel like factor 5a

Symbol

klf5a Nomenclature History

Previous Names

si:dkey-222f1.2

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in digestive tract development. Predicted to localize to nucleus. Is expressed in gut; gut epithelium; head; and pharyngeal arch. Orthologous to human KLF5 (Kruppel like factor 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from Zeng et al., 2012
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With klf5a Human Ortholog

No data available

Associated With klf5a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR013087	Zinc finger C2H2-type
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily

Domain Details Per Protein

Protein	Length	Zinc finger C2H2 superfamily	Zinc finger C2H2-type
UniProtKB:E9QG09 InterPro	429
UniProtKB:A0A8M9P800 InterPro	429

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	pibf1-204 (1) Ensembl	Ensembl		5,609 nt	Select Tool ZFIN BLAST
mRNA	pibf1-205 (1) Ensembl	Ensembl		6,168 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations