Gene

ftr51

ID

ZDB-GENE-081104-54

Name

finTRIM family, member 51

Symbol

ftr51 Nomenclature History

Previous Names

si:ch73-132m10.3 (1)

Type

protein_coding_gene

Location

Chr: 4 Mapping Details/Browsers

Description

Predicted to have zinc ion binding activity. Is expressed in brain; gill; liver; muscle; and pleuroperitoneal region. Orthologous to human RNF135 (ring finger protein 135).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Luo et al., 2017

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ftr51 Human Ortholog

No data available

Associated With ftr51 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR000315	B-box-type zinc finger
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR001870	B30.2/SPRY domain
Domain	IPR003877	SPRY domain
Domain	IPR003879	Butyrophylin-like, SPRY domain
Domain	IPR006574	SPRY-associated
Family	IPR051051	E3 ubiquitin-protein ligase TRIM/RNF
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR043136	B30.2/SPRY domain superfamily

Domain Details Per Protein

Protein	Length	B30.2/SPRY domain	B30.2/SPRY domain superfamily	B-box-type zinc finger	Butyrophylin-like, SPRY domain	Concanavalin A-like lectin/glucanase domain superfamily	E3 ubiquitin-protein ligase TRIM/RNF	SPRY-associated	SPRY domain	Zinc finger, RING/FYVE/PHD-type	Zinc finger, RING-type	Zinc finger, RING-type, conserved site
UniProtKB:F1Q5R2 InterPro	544
UniProtKB:A0A8M9PVA1 InterPro	542

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ftr51-201 (1) Ensembl	Ensembl	2,521 nt	Select Tool
mRNA	ftr51-202 (1) Ensembl	Ensembl	1,165 nt	Select Tool
mRNA	ftr51-203 (1) Ensembl	Ensembl	2,549 nt	Select Tool ZFIN BLAST
mRNA	ftr51-204 (1) Ensembl	Ensembl	375 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations