Gene

pcdh7b

ID
ZDB-GENE-081104-299
Name
protocadherin 7b
Symbol
pcdh7b Nomenclature History
Previous Names
  • sb:eu592
  • si:dkey-104n16.1 (1)
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane. Is expressed in several structures, including epidermis; nervous system; neural plate; otic vesicle; and periderm. Orthologous to human PCDH7 (protocadherin 7).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
13 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pcdh7b Human Ortholog
No data available
Associated With pcdh7b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020894 Cadherin conserved site
Domain IPR002126 Cadherin-like
Domain IPR013164 Cadherin, N-terminal
Domain IPR013585 Protocadherin
Family IPR050174 Protocadherin/Cadherin-related Cell Adhesion
Homologous_superfamily IPR015919 Cadherin-like superfamily
Domain Details Per Protein
Protein Length Cadherin conserved site Cadherin-like Cadherin-like superfamily Cadherin, N-terminal Protocadherin Protocadherin/Cadherin-related Cell Adhesion
UniProtKB:X1WEN8 1043
UniProtKB:A0A8M9QD52 1106
UniProtKB:A0A0H2UKU4 1242
UniProtKB:A0A8M9QI41 1234
UniProtKB:A0A8M9PQ84 1036
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pcdh7b-201 (1) Ensembl 3,304 nt
mRNA pcdh7b-202 (1) Ensembl 4,683 nt
mRNA pcdh7b-203 (1) Ensembl 3,729 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations