Gene

prdm2b

ID
ZDB-GENE-080613-3
Name
PR domain containing 2, with ZNF domain b
Symbol
prdm2b Nomenclature History
Previous Names
  • prdm2
  • wu:fc49e10
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II regulatory region sequence-specific DNA binding activity; and chromatin DNA binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to localize to nucleus. Orthologous to human PRDM2 (PR/SET domain 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Sun et al., 2008
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prdm2b Human Ortholog
No data available
Associated With prdm2b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001214 SET domain
Domain IPR013087 Zinc finger C2H2-type
Domain IPR044414 PRDM2, PR/SET domain
Family IPR050331 Zinc finger
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Homologous_superfamily IPR046341 SET domain superfamily
Domain Details Per Protein
Protein Length PRDM2, PR/SET domain SET domain SET domain superfamily Zinc finger Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:F1QGQ8 1792
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA prdm2b-201 (1) Ensembl 5,379 nt
mRNA prdm2b-202 (1) Ensembl 7,204 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations