Gene

setmar

ID
ZDB-GENE-080204-61
Name
SET domain and mariner transposase fusion gene
Symbol
setmar Nomenclature History
Previous Names
  • zgc:172212
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have histone-lysine N-methyltransferase activity and zinc ion binding activity. Predicted to be involved in histone lysine methylation. Predicted to localize to chromosome and nucleus. Orthologous to human SETMAR (SET domain and mariner transposase fusion gene).
Genome Resources
Note
The human and primate ortholog for this gene has both the SET domain and the mariner transposase. The non-primate orthologs do not have the mariner transposase.
Comparative Information
Expression
All Expression Data
1 figure from Sun et al., 2008
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With setmar Human Ortholog
No data available
Associated With setmar Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001214 SET domain
Domain IPR003616 Post-SET domain
Domain IPR007728 Pre-SET domain
Family IPR050973 Histone-lysine N-methyltransferase, H3 Lys-9 specific
Homologous_superfamily IPR046341 SET domain superfamily
Domain Details Per Protein
Protein Length Histone-lysine N-methyltransferase, H3 Lys-9 specific Post-SET domain Pre-SET domain SET domain SET domain superfamily
UniProtKB:A8WG60 293
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA setmar-201 (1) Ensembl 999 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations