Gene

si:ch211-125e6.5

ID
ZDB-GENE-070912-39
Name
si:ch211-125e6.5
Symbol
si:ch211-125e6.5 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have signaling receptor activity. Human ortholog(s) of this gene implicated in type 1 diabetes mellitus. Orthologous to several human genes including REG1A (regenerating family member 1 alpha); REG1B (regenerating family member 1 beta); and REG3A (regenerating family member 3 alpha).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Scheldeman et al., 2017
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With si:ch211-125e6.5 Human Ortholog
No data available
Associated With si:ch211-125e6.5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018378 C-type lectin, conserved site
Domain IPR001304 C-type lectin-like
Family IPR002353 Type-2 ice-structuring protein
Family IPR050111 C-type lectin and snaclec domain-containing protein
Homologous_superfamily IPR016186 C-type lectin-like/link domain superfamily
Homologous_superfamily IPR016187 C-type lectin fold
Domain Details Per Protein
Protein Length C-type lectin and snaclec domain-containing protein C-type lectin, conserved site C-type lectin fold C-type lectin-like C-type lectin-like/link domain superfamily Type-2 ice-structuring protein
UniProtKB:E7FAQ3 151
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:ch211-125e6.5-201 (1) Ensembl 690 nt
mRNA si:ch211-125e6.5-202 (1) Ensembl 630 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations