Gene

utrn

ID

ZDB-GENE-070228-6

Name

utrophin

Symbol

utrn Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to have actin binding activity and zinc ion binding activity. Predicted to localize to several cellular components, including cell junction; cytoskeleton; and postsynaptic membrane. Is expressed in lateral line system; muscle; notochord; pronephric duct; and somite border. Orthologous to human UTRN (utrophin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Böhm et al., 2008

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With utrn Human Ortholog

No data available

Associated With utrn Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR001589	Actinin-type actin-binding domain, conserved site
Domain	IPR000433	Zinc finger, ZZ-type
Domain	IPR001202	WW domain
Domain	IPR001715	Calponin homology domain
Domain	IPR015153	EF-hand domain, type 1
Domain	IPR015154	EF-hand domain, type 2
Family	IPR035436	Dystrophin/utrophin
Family	IPR050774	KCMF1 and Dystrophin
Homologous_superfamily	IPR011992	EF-hand domain pair
Homologous_superfamily	IPR036020	WW domain superfamily
Homologous_superfamily	IPR036872	CH domain superfamily
Homologous_superfamily	IPR043145	Zinc finger, ZZ-type superfamily
Repeat	IPR002017	Spectrin repeat
Repeat	IPR018159	Spectrin/alpha-actinin

Domain Details Per Protein

Protein	Length	Actinin-type actin-binding domain, conserved site	Calponin homology domain	CH domain superfamily	Dystrophin/utrophin	EF-hand domain pair	EF-hand domain, type 1	EF-hand domain, type 2	KCMF1 and Dystrophin	Spectrin/alpha-actinin	Spectrin repeat	WW domain	WW domain superfamily	Zinc finger, ZZ-type	Zinc finger, ZZ-type superfamily
UniProtKB:A0A8M9P595 InterPro	3523

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	utrn-201 (1) Ensembl	Ensembl	462 nt	Select Tool
mRNA	utrn-202 (1) Ensembl	Ensembl	446 nt	Select Tool
mRNA	utrn-203 (1) Ensembl	Ensembl	5,212 nt	Select Tool
mRNA	utrn-204 (1) Ensembl	Ensembl	7,899 nt	Select Tool ZFIN BLAST
mRNA	utrn-205 (1) Ensembl	Ensembl	1,664 nt	Select Tool
mRNA	utrn-206 (1) Ensembl	Ensembl	1,632 nt	Select Tool ZFIN BLAST
mRNA	utrn-207 (1) Ensembl	Ensembl	1,593 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations