Gene
trpm1a
- ID
- ZDB-GENE-070112-1372
- Name
- transient receptor potential cation channel, subfamily M, member 1a
- Symbol
- trpm1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to enable calcium channel activity. Predicted to be involved in monoatomic cation transmembrane transport. Predicted to act upstream of or within several processes, including G protein-coupled glutamate receptor signaling pathway; detection of temperature stimulus; and protein tetramerization. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in optic furrow; presumptive retinal pigmented epithelium; retinal inner nuclear layer; and retinal pigmented epithelium. Human ortholog(s) of this gene implicated in congenital stationary night blindness and congenital stationary night blindness 1C. Orthologous to human TRPM1 (transient receptor potential cation channel subfamily M member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| congenital stationary night blindness 1C | Alliance | Night blindness, congenital stationary (complete), 1C, autosomal recessive | 613216 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Ion transport domain | Transient receptor potential cation channel M | TRPM, SLOG domain | TRPM, tetramerisation domain | TRPM, tetramerisation domain superfamily |
|---|---|---|---|---|---|---|
|
UniProtKB:A1L239
|
319 | |||||
|
UniProtKB:A0A8M6Z7Q8
|
1647 | |||||
|
UniProtKB:A0A8M6YZ91
|
1552 | |||||
|
UniProtKB:E7FDL5
|
1546 | |||||
|
UniProtKB:A0A8M6Z1K6
|
1653 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trpm1a-201
(1)
|
Ensembl | 5,842 nt | ||
| mRNA |
trpm1a-202
(1)
|
Ensembl | 964 nt | ||
| mRNA |
trpm1a-203
(1)
|
Ensembl | 1,351 nt | ||
| mRNA |
trpm1a-204
(1)
|
Ensembl | 872 nt |
Interactions and Pathways
No data available
Plasmids
No data available