Gene

olfcn1

ID

ZDB-GENE-061117-2

Name

olfactory receptor C family, n1

Symbol

olfcn1 Nomenclature History

Previous Names

Dr3-1 (1)
I01 (1)
si:ch73-125k17.2
sub 3_1 (1)
v2ri1 (1)

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Description

Predicted to have G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to localize to integral component of membrane and plasma membrane. Is expressed in olfactory epithelium.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Ahuja et al., 2018

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With olfcn1 Human Ortholog

No data available

Associated With olfcn1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017979	GPCR, family 3, conserved site
Domain	IPR001828	Receptor, ligand binding region
Domain	IPR011500	GPCR, family 3, nine cysteines domain
Domain	IPR017978	GPCR family 3, C-terminal
Family	IPR000068	GPCR, family 3, extracellular calcium-sensing receptor-related
Family	IPR000337	GPCR, family 3
Family	IPR004073	GPCR, family 3, vomeronasal receptor, type 2
Homologous_superfamily	IPR028082	Periplasmic binding protein-like I
Homologous_superfamily	IPR038550	GPCR, family 3, nine cysteines domain superfamily

Domain Details Per Protein

Protein	Length	GPCR, family 3	GPCR, family 3, conserved site	GPCR family 3, C-terminal	GPCR, family 3, extracellular calcium-sensing receptor-related	GPCR, family 3, nine cysteines domain	GPCR, family 3, nine cysteines domain superfamily	GPCR, family 3, vomeronasal receptor, type 2	Periplasmic binding protein-like I	Receptor, ligand binding region
UniProtKB:F1RA84 InterPro	855

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	fp016180.1-202 (1) Ensembl	Ensembl		4,525 nt	Select Tool ZFIN BLAST
mRNA	si:ch73-125k17.2-202 (1) Ensembl	Ensembl		1,295 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations