Gene

atf7ip

ID

ZDB-GENE-061103-178

Name

activating transcription factor 7 interacting protein

Symbol

atf7ip Nomenclature History

Previous Names

fa12g02
wu:fa12g02
zgc:152981

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to be involved in positive regulation of methylation-dependent chromatin silencing and protein stabilization. Predicted to localize to nucleus. Orthologous to human ATF7IP (activating transcription factor 7 interacting protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Samarut et al., 2016

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atf7ip Human Ortholog

No data available

Associated With atf7ip Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003961	Fibronectin type III
Domain	IPR031870	ATF7-interacting protein , protein binding domain
Family	IPR026085	Activating transcription factor 7-interacting protein
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily

Domain Details Per Protein

Protein	Length	Activating transcription factor 7-interacting protein	ATF7-interacting protein , protein binding domain	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin-like fold
UniProtKB:F8W5Q4 InterPro	858
UniProtKB:A0JME2 InterPro	815
UniProtKB:A0A8M9Q0G7 InterPro	859
UniProtKB:A0A8M2B6X0 InterPro	860
UniProtKB:A0A8M2B6V3 InterPro	816

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	atf7ip-201 (1) Ensembl	Ensembl	3,061 nt	Select Tool ZFIN BLAST
mRNA	atf7ip-202 (1) Ensembl	Ensembl	607 nt	Select Tool ZFIN BLAST
mRNA	atf7ip-203 (1) Ensembl	Ensembl	3,286 nt	Select Tool ZFIN BLAST
mRNA	atf7ip-204 (1) Ensembl	Ensembl	837 nt	Select Tool ZFIN BLAST
mRNA	atf7ip-206 (1) Ensembl	Ensembl	577 nt	Select Tool ZFIN BLAST
mRNA	atf7ip-207 (1) Ensembl	Ensembl	624 nt	Select Tool ZFIN BLAST
mRNA	atf7ip-208 (1) Ensembl	Ensembl	2,451 nt	Select Tool ZFIN BLAST
ncRNA	atf7ip-007 (1) Ensembl	Ensembl	690 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations