Gene

nt5c2b

ID
ZDB-GENE-061013-522
Name
5'-nucleotidase, cytosolic IIb
Symbol
nt5c2b Nomenclature History
Previous Names
  • im:7162273
  • zgc:153651
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have 5'-nucleotidase activity. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 45. Orthologous to human NT5C2 (5'-nucleotidase, cytosolic II).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Vishnolia et al., 2020
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nt5c2b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
hereditary spastic paraplegia 45 Alliance Spastic paraplegia 45, autosomal recessive 613162
Associated With nt5c2b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR008380 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
Family IPR016695 Purine 5'-nucleotidase
Homologous_superfamily IPR023214 HAD superfamily
Homologous_superfamily IPR036412 HAD-like superfamily
Domain Details Per Protein
Protein Length HAD-like superfamily HAD superfamily HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase Purine 5'-nucleotidase
UniProtKB:F1QAK5 562
UniProtKB:A0A8M9PH62 564
UniProtKB:A0A8M9PUC7 370
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nt5c2b-201 (1) Ensembl 1,982 nt
ncRNA nt5c2b-002 (1) Ensembl 2,295 nt
ncRNA nt5c2b-003 (1) Ensembl 2,148 nt
ncRNA nt5c2b-004 (1) Ensembl 716 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations