Gene

vrtn

ID
ZDB-GENE-060929-700
Name
vertebrae development associated
Symbol
vrtn Nomenclature History
Previous Names
  • zgc:153349
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific. Involved in negative regulation of transcription by RNA polymerase II. Localizes to chromatin. Is expressed in several structures, including blastodisc; margin; oocyte; tail bud; and yolk. Orthologous to human VRTN (vertebrae development associated).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Shao et al., 2017
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Shao et al., 2017
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With vrtn Human Ortholog
No data available
Associated With vrtn Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR047273 Vertnin-like, ovarian tumor domain
Family IPR038822 Vertnin-like
Domain Details Per Protein
Protein Length Vertnin-like Vertnin-like, ovarian tumor domain
UniProtKB:Q08C99 677
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA vrtn-201 (1) Ensembl 3,354 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations