Gene

opn7c

ID
ZDB-GENE-060526-333
Name
opsin 7, group member c
Symbol
opn7c Nomenclature History
Previous Names
  • novopsin-5 (1)
  • Opn5L1b (1)
  • si:dkey-72l14.7
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to have G protein-coupled photoreceptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; cellular response to light stimulus; and phototransduction. Predicted to localize to integral component of plasma membrane and photoreceptor outer segment. Is expressed in several structures, including brain; eye; heart; integument; and testis.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from Davies et al., 2015
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With opn7c Human Ortholog
No data available
Associated With opn7c Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR027430 Visual pigments (opsins) retinal binding site
Domain IPR017452 GPCR, rhodopsin-like, 7TM
Family IPR000276 G protein-coupled receptor, rhodopsin-like
Family IPR002962 Peropsin
Family IPR050125 G-protein coupled receptor opsins
Domain Details Per Protein
Protein Length GPCR, rhodopsin-like, 7TM G-protein coupled receptor opsins G protein-coupled receptor, rhodopsin-like Peropsin Visual pigments (opsins) retinal binding site
UniProtKB:Q1LVD8 404
UniProtKB:A0A8M9Q9Q8 307
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA opn7c-201 (1) Ensembl 1,481 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations