Gene

gpsm1a

ID
ZDB-GENE-060526-302
Name
G protein signaling modulator 1a
Symbol
gpsm1a Nomenclature History
Previous Names
  • si:dkey-43f11.1
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to enable GTPase regulator activity. Orthologous to human GPSM1 (G protein signaling modulator 1) and GPSM3 (G protein signaling modulator 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With gpsm1a Human Ortholog
No data available
Associated With gpsm1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR003109 GoLoco motif
Family IPR052386 G-protein-signaling modulator
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
1 - 3 of 3
Domain Details Per Protein
Protein Length GoLoco motif G-protein-signaling modulator Tetratricopeptide-like helical domain superfamily
UniProtKB:A0A8M3BA08
InterPro
183
UniProtKB:A0A0R4IGX8
InterPro
165
1 - 2 of 2
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 5
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA gpsm1a-201 (1)
Ensembl
Ensembl 517 nt
ZFIN BLAST
mRNA gpsm1a-202 (1)
Ensembl
Ensembl 5,571 nt
ZFIN BLAST
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-43F11ZFIN Curated Data
1 - 1 of 1
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_001343578 (1)
ZFIN BLASTNCBI BLASTMegaBLASTEnsemblUCSC BLAT
GenomicGenBank:AL845516 (1)205826 nt
MegaBLAST
PolypeptideUniProtKB:A0A8M3BA08 (1)183 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanGPSM19
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseGpsm12
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
TSV
1 - 2 of 2
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