Gene
ankdd1b
- ID
- ZDB-GENE-060526-136
- Name
- ankyrin repeat and death domain containing 1B
- Symbol
- ankdd1b Nomenclature History
- Previous Names
-
- si:ch211-254o18.2
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to act upstream of or within signal transduction. Is expressed in gill filament; intestine; skeletal muscle; and splanchnocranium. Orthologous to human ANKDD1B (ankyrin repeat and death domain containing 1B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Vaz et al., 2017
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000488 | Death domain |
| Family | IPR052457 | Ankyrin repeat and death domain-containing protein |
| Homologous_superfamily | IPR011029 | Death-like domain superfamily |
| Homologous_superfamily | IPR036770 | Ankyrin repeat-containing domain superfamily |
| Repeat | IPR002110 | Ankyrin repeat |
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Domain Details Per Protein
| Protein | Length | Ankyrin repeat | Ankyrin repeat and death domain-containing protein | Ankyrin repeat-containing domain superfamily | Death domain | Death-like domain superfamily |
|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M9PZ15
|
590 | |||||
|
UniProtKB:A0A8M3B9V5
|
586 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ankdd1b-201
(1)
|
Ensembl | 1,425 nt | ||
| mRNA |
ankdd1b-202
(1)
|
Ensembl | 1,241 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-254O18 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_009301750 (1) | |||
| Genomic | GenBank:BX294131 (1) | 164141 nt | ||
| Polypeptide | UniProtKB:A0A8M9PZ15 (1) | 590 aa |
- Casey, M.A., Hill, J.T., Hoshijima, K., Bryan, C.D., Gribble, S.L., Brown, J.T., Chien, C.B., Yost, H.J., Kwan, K.M. (2021) Shutdown corner, a large deletion mutant isolated from a haploid mutagenesis screen in zebrafish. G3 (Bethesda). 12(3):
- Vaz, R., Lindstrand, A. (2017) ankdd1b expression pattern in early stages of zebrafish development. ZFIN Direct Data Submission.
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
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