Gene

omd

ID

ZDB-GENE-060503-756

Name

osteomodulin

Symbol

omd Nomenclature History

Previous Names

sb:eu895
si:ch211-103f16.5

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to be involved in regulation of bone mineralization. Predicted to localize to extracellular space. Orthologous to human OMD (osteomodulin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2005

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu895 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With omd Human Ortholog

No data available

Associated With omd Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000372	Leucine-rich repeat N-terminal domain
Family	IPR050333	Small Leucine-Rich Proteoglycans
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Repeat	IPR001611	Leucine-rich repeat
Repeat	IPR003591	Leucine-rich repeat, typical subtype

Domain Details Per Protein

Protein	Length	Leucine-rich repeat	Leucine-rich repeat domain superfamily	Leucine-rich repeat N-terminal domain	Leucine-rich repeat, typical subtype	Small Leucine-Rich Proteoglycans
UniProtKB:F6NL91 InterPro	401

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	omd-201 (1) Ensembl	Ensembl		1,861 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations