Gene
pkhd1l1.1
- ID
- ZDB-GENE-060503-475
- Name
- PKHD1 like 1, tandem duplicate 1
- Symbol
- pkhd1l1.1 Nomenclature History
- Previous Names
-
- pkhd1l1
- si:ch211-122p23.3
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to localize to cilium. Orthologous to human PKHD1L1 (PKHD1 like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Makrogkikas et al., 2023
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Deafness, autosomal recessive 124 | 620794 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002909 | IPT domain |
| Domain | IPR011658 | PA14 domain |
| Domain | IPR019316 | G8 domain |
| Domain | IPR037524 | PA14/GLEYA domain |
| Homologous_superfamily | IPR008972 | Cupredoxin |
| Homologous_superfamily | IPR011050 | Pectin lyase fold/virulence factor |
| Homologous_superfamily | IPR012334 | Pectin lyase fold |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR014756 | Immunoglobulin E-set |
| Repeat | IPR006626 | Parallel beta-helix repeat |
Domain Details Per Protein
| Protein | Length | Cupredoxin | G8 domain | Immunoglobulin E-set | Immunoglobulin-like fold | IPT domain | PA14 domain | PA14/GLEYA domain | Parallel beta-helix repeat | Pectin lyase fold | Pectin lyase fold/virulence factor |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M1P7C8
|
4208 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pkhd1l1-201
(1)
|
Ensembl | 13,133 nt |
Interactions and Pathways
No data available
Plasmids
No data available