Gene

si:dkey-237i9.1

ID
ZDB-GENE-060503-441
Name
si:dkey-237i9.1
Symbol
si:dkey-237i9.1 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to enable RIG-I binding activity. Predicted to be involved in negative regulation of RIG-I signaling pathway. Predicted to be active in cytosol. Orthologous to human SEC14L1 (SEC14 like lipid binding 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With si:dkey-237i9.1 Human Ortholog
No data available
Associated With si:dkey-237i9.1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001251 CRAL-TRIO lipid binding domain
Domain IPR006797 PRELI/MSF1 domain
Domain IPR009038 GOLD domain
Domain IPR011074 CRAL/TRIO, N-terminal domain
Family IPR037365 Slowmo/Ups family
1 - 5 of 9 Show all
Domain Details Per Protein
Protein Length CRAL-TRIO lipid binding domain CRAL-TRIO lipid binding domain superfamily CRAL/TRIO, N-terminal domain CRAL/TRIO, N-terminal domain superfamily GOLD domain GOLD domain superfamily PRELI/MSF1 domain SEC14-like and CRAL-TRIO domain-containing protein Slowmo/Ups family
UniProtKB:A0A8M9Q0B8
InterPro
719
UniProtKB:A0A8M9PRD5
InterPro
125
1 - 2 of 2
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sec14l1-202 (1)
Ensembl
Ensembl 1,752 nt
ZFIN BLAST
mRNA si:dkey-237i9.1-001 (1)
Ensembl
Ensembl 591 nt
ZFIN BLAST
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-237I9ZFIN Curated Data
1 - 1 of 1
Show
Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_021471759 (1)
ZFIN BLASTNCBI BLASTMegaBLASTEnsemblUCSC BLAT
GenomicGenBank:BX005286 (1)178225 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8M9Q0B8 (1)719 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
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