Gene

smarcc1b

ID

ZDB-GENE-060503-273

Name

SWI/SNF related BAF chromatin remodeling complex subunit C1b

Symbol

smarcc1b Nomenclature History

Previous Names

si:dkeyp-114f9.3

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have histone binding activity. Predicted to be involved in ATP-dependent chromatin remodeling and positive regulation of transcription, DNA-templated. Predicted to localize to SWI/SNF complex; nBAF complex; and npBAF complex. Orthologous to human SMARCC1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Wang et al., 2017

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With smarcc1b Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		{Hydrocephalus, congenital, 5, susceptibility to}	620241

Associated With smarcc1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001005	SANT/Myb domain
Domain	IPR007526	SWIRM domain
Domain	IPR017884	SANT domain
Domain	IPR032448	SMARCC, SWIRM-associated domain
Domain	IPR032450	SMARCC, N-terminal
Domain	IPR032451	SMARCC, C-terminal
Domain	IPR049898	MarR-like, BRCT and chromo domains module
Homologous_superfamily	IPR009057	Homedomain-like superfamily
Homologous_superfamily	IPR036388	Winged helix-like DNA-binding domain superfamily
Homologous_superfamily	IPR036420	BRCT domain superfamily