Gene

atxn10

ID

ZDB-GENE-060503-180

Name

ataxin 10

Symbol

atxn10 Nomenclature History

Previous Names

si:dkeyp-15g12.2

Type

protein_coding_gene

Location

Chr: 4 Mapping Details/Browsers

Description

Predicted to be involved in neuron projection development. Predicted to be located in membrane. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 10. Orthologous to human ATXN10 (ataxin 10).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atxn10 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
spinocerebellar ataxia type 10	Alliance	Spinocerebellar ataxia 10	603516

Associated With atxn10 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR003006	Immunoglobulin/major histocompatibility complex, conserved site
Domain	IPR019156	Ataxin-10 domain
Family	IPR051374	Ataxin-10 and Copper transport protein 86 families
Homologous_superfamily	IPR011989	Armadillo-like helical
Homologous_superfamily	IPR016024	Armadillo-type fold

Domain Details Per Protein

Protein	Length	Armadillo-like helical	Armadillo-type fold	Ataxin-10 and Copper transport protein 86 families	Ataxin-10 domain	Immunoglobulin/major histocompatibility complex, conserved site
UniProtKB:B3DJT3 InterPro	484
UniProtKB:A0A8M9QAW4 InterPro	402

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	atxn10-201 (1) Ensembl	Ensembl	1,588 nt	Select Tool ZFIN BLAST
mRNA	atxn10-202 (1) Ensembl	Ensembl	1,278 nt	Select Tool ZFIN BLAST
mRNA	atxn10-203 (1) Ensembl	Ensembl	1,704 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations